Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g1242 ATGGTATTAAGTTTAATAAACTTCCTAACTGCCTGTTTGCGGCGACAACAACAACAACAACAACAGCAATGCTCGGCTTCTTCGTCGGATCGAAAGGGTTCGGATGTTAGTGGACGTAAAGAAGGGCTGCTTTGGTATAAGGATGTTGGGCAACACTTGTTTGGTGAATACTCAATGGCTGTTGTTCAGGCTAATAATTTGCTCGAGGATCAGAGCCAGATTGAGTCTGGTCCTCTTACTTCGCTTCATGATGGCCCACATGCTACATTTGTTGGTGTTTATGATGGTCATGGTGGACCCGAAACTTCGCGCTACATTTGTGATAACCTCTTCCAGCATCTAAAACGATTTGCATCTGAGCACAAGTCTATGTCCGTGGAGGTTATTCGCAAGGCATACCAAGCTACGGAAGAAGGTTTTCTGTCGGTGGTTACCAAACACTGGCCCGTGAATCCCCAAATTGCTGCTGTGGGATCTTGTTGTTTGGTTGGAGTGATTTGCAGTGGTACCCTCTATGTTGCTAACCTTGGTGATTCCCGTGCCGTGCTTGGTCGGGTTGTCAGAGCAACTGGTGAGGTTCTGGCAATCCAACTCTCATCAGAGCATAATGTGGCCATAGAATCTGTGAGACAAGAGATGCATTCTCTGCATCCGGATGACTCGAAAATCGTAGTTCTGAAGCACAACGTATGGCGGGTGAAGGGCCTGATACAGGTTTCTAGATCCATTGGTGATGCATACCTTAAAAAGGCCGAATTTAACAAGGAACCTTTGTATACTAAGTTTCGTCTTCGGGAAACTTTTAAGACGCCAATTTTGAGCTCTGACCCATCAATTTCTGTTCACGAACTTCAAGAACATGATCAATTTCTCGTATTTGCATCGGATGGTCTTTGGGAACACCTTAGCAATCAGGATGCTGTTGATATAGTTCAAAATAACCCACACAATGGAATTGCTCGGAGGCTCATCAAAGCTGCTTTGCAGGAAGCAGCGAAGAAACGAGAGATGAGGTACTCTGATTTGAAGAAGATTGACCGCGGTGTACGCCGTCATTTCCACGATGACATCACAGTTGTAGTTGTATTTCTTGATTCCAACCTTGTGAGCAGAGCCAGCTCAGTAAAAGGACCTCCCTTATCGGTAAGGGGAGGTGGCATTCCCGTACCTTCAAGAACCTTGTCTCCCTTCGCTGATCCTACGGGAACTTAG 1212 0.4587 MVLSLINFLTACLRRQQQQQQQQCSASSSDRKGSDVSGRKEGLLWYKDVGQHLFGEYSMAVVQANNLLEDQSQIESGPLTSLHDGPHATFVGVYDGHGGPETSRYICDNLFQHLKRFASEHKSMSVEVIRKAYQATEEGFLSVVTKHWPVNPQIAAVGSCCLVGVICSGTLYVANLGDSRAVLGRVVRATGEVLAIQLSSEHNVAIESVRQEMHSLHPDDSKIVVLKHNVWRVKGLIQVSRSIGDAYLKKAEFNKEPLYTKFRLRETFKTPILSSDPSISVHELQEHDQFLVFASDGLWEHLSNQDAVDIVQNNPHNGIARRLIKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVVVVFLDSNLVSRASSVKGPPLSVRGGGIPVPSRTLSPFADPTGT* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g1242 403 CDD PP2Cc 54 364 IPR001932 -
Lan17g1242 403 Gene3D - 10 374 IPR036457 -
Lan17g1242 403 ProSiteProfiles PPM-type phosphatase domain profile. 53 364 IPR001932 -
Lan17g1242 403 SMART PP2C_4 46 362 IPR001932 -
Lan17g1242 403 MobiDBLite consensus disorder prediction 383 403 - -
Lan17g1242 403 ProSitePatterns PPM-type phosphatase domain signature. 90 98 IPR000222 GO:0043169
Lan17g1242 403 PANTHER PROTEIN PHOSPHATASE 2C 60-RELATED 23 393 - -
Lan17g1242 403 Pfam Protein phosphatase 2C 81 333 IPR001932 -
Lan17g1242 403 PANTHER ALPHABET, ISOFORM E-RELATED 23 393 - -
Lan17g1242 403 SUPERFAMILY PP2C-like 65 365 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g1242 Lan-Chr17 20730186 20738320 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g1242 1 392 PP2C-type Phosphatase Gene Family AT3G51370 73.469 0.0 605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g1242 K01102 - gmx:100777920 698.738