Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g1229 ATGTCTTCTTCTAACTATGCTTCAATCAATACCTTGTTTTTTCTCTTTCTTGCAGTGCTTGTTGCACAAGTTAGTTTTTGCTTTTCTTCTAAGGTTTATGTAGTGTACATGGGAAGCAAAATTGAAGAACAACACCATGATGATATTATGAAGCAAAACTATAAAATGATTGCTTCTGTTCATAGTGGAAGCTTTGAGAAAGCACAAGCTTCTCATGTTTATAGCTATATGCATGGTTTCAGAGGTTTTGCTGCTAAGCTCACTGATGAACAAGCTTCAAAAATTTCCAAAATGGAAGGGGTGGTTTCAGTGTTTCCAAATTGTAAAAGAAAGCTACACACAACTCACTCATGGGATTTCATGGGGCTTCTTGATGACCAAACAATGGAGACTCTTGGTTATTCTATTAGGAACCAAGAAAATATCATCATTGGTTTCATTGATACAGGAATTTGGCCAGAATCTCCAAGTTTTAGTGACACCGACATGCCACCAGTGCCACCTAGATGGAAGGGACAATGTCAATCAGGAGAAGCATTCAATGCATCATCATGCAACAGGAAAGTAATTGGAGCTAGATACTACATGAGTGGATATGAAGCAGAAGAAGATTCAGATACAAAAGTGTCTTTCAAATCGGCTAGAGATAGCAATGGCCATGGAAGCCATACAGCTTCCATAGCTACAGGAAGATATGTAGCAAACATGAACTATAAGGGTCTTGGAGCTGGAGGAGCAAGAGGAGGTGCACCTATGGCAAGGATTGCAGTGTATAAAACATGTTGGGATTCTGGTTGCTATGATGTTGATTTGTTAGCTGCATTTGATGATGCTATAAGAGATGGTGTTCATATTTTGTCTCTATCTCTTGGTGCACAATCTCCACAAGGAGATTATTTCAATGATGCAATATCTGTTGGGTCATTTCATGCTGCTAAACGTGGAGTCATGGTTGTAGCATCAGCTGGAAATGAAGGAATACCTGGTTCTGCTACAAATCTTGCACCATGGATTCTCACTGTTGCTGCTAGCTCAACAGATAGAGATTTTACTTCTGATATTGTGTTAGGAAATGGTGCTAAAATCATGGGTGAAAGTCTCACTCTCTTGGGAATGAATGCCTCCACAAGGATAATTTCTGCTTCTGAAGCCTATGCAGGATATTTTACTCCTTATCAATCCAGTTACTGTCTAGATAGTTCTATGAATAAGACCAAGACAAAGGGAAAGGTTCTAGTCTGTAGACATGTACAAAGTTCCACAGAGTCTAAGGTAGCAAAGAGTAAGGTAGTGAAAGAGGTAGGTGGAGTTGGAATGATACTTATTGATGAGACAGATCAAGATGTTGCAATCCCATTTGTGATCCCTTCAGCTATTATTGGAAGGAAAACAGGAGAAAGGATTCTATCCTACCTCAAGAACACAAGTAAGCCTAGATCAAGGATTTTGGGAGCAAAGACAGTACTAGGAGCTAAGCCTGCGCCCCGTATAGCAGCATTTTCATCTAAAGGTCCCAATGCTTTAAATCCAGAAATTCTGAAGCCTGATGTTACGGCTCCAGGACTGAATATCCTTGCAGCATGGTCTCCAGCAGCTGGAAACATGTTCAACATTATGTCAGGAACTTCTATGGCTTGTCCTCATGTAACTGGAATTGCAACCTTAGTCAAAGCTGTTCATCCTTTATGGTCTCCATCTGCTATCAAATCTGCCATCATGACAACAGCTACTATTCTAGATAAGCACCACAGGCCCATCAGTGCAGATCCTGGGCGAAGAAGGGCTAATGCATTTGATTATGGATCAGGGTTTGTGAACCCTGCAAGAGTTCTTGAGCCTGGTCTAATCTATGATTCAGAGCCATCAGATTTTGTTGCATTCCTTTGTTCACTTGGTTATGATCAGCGCTCGCTCCGTCTTGTCACTAGAGACAACAGCACATGTGAACGGGCATTCAGAACTGCATCTGACCTCAACTATCCATCTATAACAATGCCTAATCTTAAAGACAACTCTACAGTAACTCGTATTGTGACTAATGTTGGAAAAGCAAGAAGTATATATAAAGCTGTAGTGTCTTCTCCTCCTGGTATTAATGTCACTGTTATTCCAAGCCGGTTAATCTTCACGAGAATCGGGCAGAAAATCAAGTTCACTGTGAATTTCAAAATAACTGCTCCCTCAAAGGGCTATGCATTTGGATTTTTCTCATGGACGAACGGAATATCACAAGTAACCAGTCCTTTAGTTGTTCGGGTTGCATCTACAAACCATGGGTTGGGGAGATAG 2289 0.4072 MSSSNYASINTLFFLFLAVLVAQVSFCFSSKVYVVYMGSKIEEQHHDDIMKQNYKMIASVHSGSFEKAQASHVYSYMHGFRGFAAKLTDEQASKISKMEGVVSVFPNCKRKLHTTHSWDFMGLLDDQTMETLGYSIRNQENIIIGFIDTGIWPESPSFSDTDMPPVPPRWKGQCQSGEAFNASSCNRKVIGARYYMSGYEAEEDSDTKVSFKSARDSNGHGSHTASIATGRYVANMNYKGLGAGGARGGAPMARIAVYKTCWDSGCYDVDLLAAFDDAIRDGVHILSLSLGAQSPQGDYFNDAISVGSFHAAKRGVMVVASAGNEGIPGSATNLAPWILTVAASSTDRDFTSDIVLGNGAKIMGESLTLLGMNASTRIISASEAYAGYFTPYQSSYCLDSSMNKTKTKGKVLVCRHVQSSTESKVAKSKVVKEVGGVGMILIDETDQDVAIPFVIPSAIIGRKTGERILSYLKNTSKPRSRILGAKTVLGAKPAPRIAAFSSKGPNALNPEILKPDVTAPGLNILAAWSPAAGNMFNIMSGTSMACPHVTGIATLVKAVHPLWSPSAIKSAIMTTATILDKHHRPISADPGRRRANAFDYGSGFVNPARVLEPGLIYDSEPSDFVAFLCSLGYDQRSLRLVTRDNSTCERAFRTASDLNYPSITMPNLKDNSTVTRIVTNVGKARSIYKAVVSSPPGINVTVIPSRLIFTRIGQKIKFTVNFKITAPSKGYAFGFFSWTNGISQVTSPLVVRVASTNHGLGR* 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g1229 762 Pfam PA domain 385 468 IPR003137 -
Lan17g1229 762 Pfam Subtilase family 140 579 IPR000209 GO:0006508|GO:0008236
Lan17g1229 762 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 21 755 IPR045051 -
Lan17g1229 762 Pfam Fibronectin type-III domain 657 751 IPR041469 -
Lan17g1229 762 ProSitePatterns Serine proteases, subtilase family, serine active site. 541 551 IPR023828 -
Lan17g1229 762 CDD Peptidases_S8_3 111 577 IPR034197 -
Lan17g1229 762 Gene3D - 628 754 - -
Lan17g1229 762 ProSiteProfiles Serine proteases, subtilase domain profile. 117 611 - -
Lan17g1229 762 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 27 113 IPR037045 -
Lan17g1229 762 CDD PA_subtilisin_like 353 482 - -
Lan17g1229 762 Gene3D Peptidase S8/S53 domain 141 624 IPR036852 GO:0004252|GO:0006508
Lan17g1229 762 PRINTS Subtilisin serine protease family (S8) signature 139 158 IPR015500 -
Lan17g1229 762 PRINTS Subtilisin serine protease family (S8) signature 216 229 IPR015500 -
Lan17g1229 762 PRINTS Subtilisin serine protease family (S8) signature 540 556 IPR015500 -
Lan17g1229 762 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 21 755 - -
Lan17g1229 762 SUPERFAMILY Subtilisin-like 112 615 IPR036852 GO:0004252|GO:0006508
Lan17g1229 762 Pfam Peptidase inhibitor I9 32 113 IPR010259 -
Lan17g1229 762 Gene3D - 347 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g1229 Lan-Chr17 20610235 20616848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g1229 30 753 Subtilisin-like Serine Gene Family AT2G04160 42.914 0.0 556
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g1229 - - gmx:100808547 1275.38