Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g1223 ATGGCACCAAATATAATGGGAAGCATAAGGATGGGACATTGTTTAAGCCTTATAATATGTGTACTGCTATTGCTAAAGGCCGAAGGGATTTCTGTATCGATCAGTTTTGTTGAAAATGCAGTAACAAAAGGAGCTGTTTGTTTGGATGGAAGTCCGCCAGCTTACCACTTCGATAAGGGATTCGGAGCAGGGATAAACAATTGGATAGTTCATGTTGAGGGAGGAGGGTGGTGCAACAACGTCACTACTTGTCTTGACCGCAGGGATACTCGTTTAGGCTCATCCAAGAAAATGGATGGAGTAGTTTCCTTTTCTGGATTTTTCAGTAACAAGCAAAAGTTTAATCCAGATTTCTATGATTGGAACAGAATCAAGGTTAGGTACTGTGACGGGGCATCATTTACTGGTGATGTCGAAGCAGTCGATCCAGCAACCAATTTGCACTTCAGAGGATCAAGGGTTTTTGTTGCTGTCATTGAGGAGTTACTAGCAAAAGGAATGAAAAATGCTCAAAATGTTATTTTCTCCGGGTGTTCAGCTGGAGGATTGACGACTATACTACTTTGCGATCGCTTTAGAGGTCTATTACCTACAGGGGCTAAAGTGAAATGTCTTTCAGATGCCGGTTATTTTATCAATGTAAAGGACGTCTCTGGAGCATCACACATTGAAGAATTCTACAGCCAAGTTGTTAAAACACATGGATCAGCAAAGAATTTGCCTCTATCATGCACTTCGAGACTCAGTCCAGGACTGTGCTTTTTCCCACAAAATGTCGCTTCACAAATCAATACACCGATTTTCTTTATAAACGCGGCTTATGACTCATGGCAGATTAAGAATATCTTGGCACCGGGTGTTGCTGACCCCCATGGCCAATGGCATGACTGCAAGCTTGATATAAAGAAATGCTCATCTTCTCAACTAAGTATTATGCAAGGCTTCAGGAATGATTTCATGAAGGCGTTGACTGCAGTAGGAAACTCTCCATCTAAAGGAACGTTCATAGACGCGTGCTATGCCCACTGTCAAACCGGAATGCAGGAAACCTGGTTGAGAAATGACTCTCCTTTGCTTGCCAATACAACAATAGCAAAGGCTGTTGGAGACTGGTTTTATGACAGAAAGCCTTTTCATCAGACAGATTGCACTTACCCTTGCAACCCAACTTGTCATAACCGAGTATTTGATGACAACAATTCAAGAGTATAG 1212 0.4208 MAPNIMGSIRMGHCLSLIICVLLLLKAEGISVSISFVENAVTKGAVCLDGSPPAYHFDKGFGAGINNWIVHVEGGGWCNNVTTCLDRRDTRLGSSKKMDGVVSFSGFFSNKQKFNPDFYDWNRIKVRYCDGASFTGDVEAVDPATNLHFRGSRVFVAVIEELLAKGMKNAQNVIFSGCSAGGLTTILLCDRFRGLLPTGAKVKCLSDAGYFINVKDVSGASHIEEFYSQVVKTHGSAKNLPLSCTSRLSPGLCFFPQNVASQINTPIFFINAAYDSWQIKNILAPGVADPHGQWHDCKLDIKKCSSSQLSIMQGFRNDFMKALTAVGNSPSKGTFIDACYAHCQTGMQETWLRNDSPLLANTTIAKAVGDWFYDRKPFHQTDCTYPCNPTCHNRVFDDNNSRV* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g1223 403 Pfam Pectinacetylesterase 26 377 IPR004963 GO:0016787
Lan17g1223 403 SUPERFAMILY alpha/beta-Hydrolases 149 277 IPR029058 -
Lan17g1223 403 PANTHER PECTIN ACETYLESTERASE 9 399 - -
Lan17g1223 403 PANTHER NOTUM-RELATED 9 399 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g1223 Lan-Chr17 20568081 20572943 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g1223 10 396 Carbohydrate Esterase AT4G19420 58.768 0.0 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g1223 K19882 - gmx:100781246 677.552