Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g1222 ATGGCAGAAGGGGCTTATGTTCCAATCACTATTGTTAATGATGCAGTATCAAAAGGAGCAGTTTGTTTGGATGGGAGTCCACCAGCTTACCACTTTGATAAGGGAAGTGGAGAAGGAATTAACAACTGGGTTGTTCACATTGAGGGTGGAGGATGGTGCAACGATGTCACGTCTTGCGTGTGGCGTAAGGACACTCATTTAGGTTCGTCGGAGAAAATGGAGGAGCAAGCTTACTTTGCAGGACTTTTAAGTGACACAGAAAACCTCAATCCAGATTTCTACAATTGGAACAGAGTCAAGATTAGGTACTGCGATGGAGGATCGTTTACTGGCGATGTGGAAGAAGTCGATCCAGGAAACAATTTGCACTTCAGAGGAGCAAGGATTTTTGTTACTGTCATCGGCGAATTACTAGCGAAAGGAATGCAAAATGCTGAAAATGCTCTTCTATCTGGATGCTCAGCAGGAGGATTAGCTTCTATATTAAATTGCGATCGCTTTAAATCTCTATTACCGGGGGGAGCTACGGTGAAATGCCTTTCGGATGCTGGTTATTTTGTCAATGTAAAGGATATCTCGGGTGCACAACGCATTGAAGAGTTCTATAGTCAAGTCGTCCAAACTCATGGCTCAGCAAAGCATTTACCTGAATCATGCACTTCAAGACTCAGTCCAGGGCTTTGCTTTTTCCCGGAATACGTGGCATCAGAAATCGATGCACCAATTTTCATCGTAAACGCGGCCTATGACCCATGGCAGATTCAAAACATTTTGGCACCTGGTGTTGCCGATCCAGGTGGTTCTTGGCGAAGTTGTGACCTTGATATAAAAAGCTGCTCACCTGATCAACTAAGTATAGTGCAAGAATTCAGGACAGAATTCCTAAAGGCATTGAGTCCTCTAGGAAATTCTCCATCTAAAGGAATGTTCATAGACTCTTGCTATATCCACTGTCAAACAGAAACACAAGAAACATGGTTGCACAATGATGCTCCACTTCTATCCAATTCAACAATTTCAAAAGCTGTTGGAGACTGGTTTTATGAAAGAAGTGCTTCCAATAAGAAAATAGATTGTAGTTACCCTTGCAACCCAACATGCCATAGCAGAGTTTTTGATGCAAGAAAGTACCCAGGGATATTCCTTTAA 1149 0.4265 MAEGAYVPITIVNDAVSKGAVCLDGSPPAYHFDKGSGEGINNWVVHIEGGGWCNDVTSCVWRKDTHLGSSEKMEEQAYFAGLLSDTENLNPDFYNWNRVKIRYCDGGSFTGDVEEVDPGNNLHFRGARIFVTVIGELLAKGMQNAENALLSGCSAGGLASILNCDRFKSLLPGGATVKCLSDAGYFVNVKDISGAQRIEEFYSQVVQTHGSAKHLPESCTSRLSPGLCFFPEYVASEIDAPIFIVNAAYDPWQIQNILAPGVADPGGSWRSCDLDIKSCSPDQLSIVQEFRTEFLKALSPLGNSPSKGMFIDSCYIHCQTETQETWLHNDAPLLSNSTISKAVGDWFYERSASNKKIDCSYPCNPTCHSRVFDARKYPGIFL* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g1222 382 Pfam Pectinacetylesterase 3 351 IPR004963 GO:0016787
Lan17g1222 382 PANTHER NOTUM-RELATED 2 376 IPR004963 GO:0016787
Lan17g1222 382 PANTHER PECTIN ACETYLESTERASE 2 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g1222 Lan-Chr17 20553319 20557661 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g1222 2 380 Carbohydrate Esterase AT4G19420 58.696 0.0 524
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g1222 K19882 - gmx:100781246 584.719