Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g1220 ATGGCATTATCATCATCATCTTCATCAGATTCAGGTGATGAAATATGGAAAGCACATTCAGCCATGGCGGTTGTTCAATTATTCTACGGTGGCTATCATGTTATCACTAAATTGGCTCTTAACGTTGGCGTTAATCAAATCGTGTTTTGTGTTTTTCGTGATCTTCTTGCTCTTTCAATTCTCGCTCCTCTCGCTTATTTCCGTGAAATACGGACACGACCACCCATAACCAAGCCTCTGTTGATGTCATTCTTCCTTCTTGGATTAACTGGGATATTTGGCAACCACCTTTTGTTTCTTATCGGTTTAAGCTATACTAATCCAACTTATGCAGCTGCAATACAGCCAGCTACACCAGTCTTTACATTTCTGTTTGCTGTAATGATGGGTACAGAAAGAGTGAACTTGCTAAGGTACGAAGGTCTGGCCAAGGTTGGTGGAACTCTTATCTGTGTTTCGGGTGCCATATTGATGGTTTTGTATCGCGGTCCAGCATTGATAGGAGATGCAGAAACGGATCTTGTATCACAAAGCGAAATAAGTGCTCGGGGTCAACCAGAGCCTTCTGGATGGTTAATTGGTAGTTTACAGGATCTTGGTTTAGACCACTTTCACCTCGGGGTTCTTTGCTTCATAGGGAACTGCATGTGCATGGCTGCTTTTTTATCCATTCAGGCACCATTATTAAAAAAGTATCCTGCAAACCTCTCTGTCACAGCATATTCGTACTTCTTTGGAGCTTTACTGATGGTGACAACATCATTCTTCGCGACTAACGAGTCAACTGACTGGAGTTTGACGCAATCTGAAACAATTGCTGTTATTTATGCTGGAGTTATTGCTTCTGCTCTTAACTATGGACTCATTACTTGGTCCAACAAGATCTTGGGGCCGGCGATGGTTGCTCTTTATAATCCACTTCAACCCGGCGCTTCCGCACTCCTGTCCAGAATCTTTCTTGGAAGTCCGATTTACATGGGAAGCATCTTAGGGGGATCTTTAATCATTACTGGTCTATACGCGGTTACTTGGGCATCTTATAGAGAAAGACAAGCAGCTTCTGTGGCTATTCCTGTGAAGAATTCATACCAGAGAGGTCATATTTTCTCAGGCCACACAATCTTACCCACAAAGCCTTCTGATTAA 1146 0.4276 MALSSSSSSDSGDEIWKAHSAMAVVQLFYGGYHVITKLALNVGVNQIVFCVFRDLLALSILAPLAYFREIRTRPPITKPLLMSFFLLGLTGIFGNHLLFLIGLSYTNPTYAAAIQPATPVFTFLFAVMMGTERVNLLRYEGLAKVGGTLICVSGAILMVLYRGPALIGDAETDLVSQSEISARGQPEPSGWLIGSLQDLGLDHFHLGVLCFIGNCMCMAAFLSIQAPLLKKYPANLSVTAYSYFFGALLMVTTSFFATNESTDWSLTQSETIAVIYAGVIASALNYGLITWSNKILGPAMVALYNPLQPGASALLSRIFLGSPIYMGSILGGSLIITGLYAVTWASYRERQAASVAIPVKNSYQRGHIFSGHTILPTKPSD* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g1220 381 PANTHER WAT1-RELATED PROTEIN 16 359 - -
Lan17g1220 381 Pfam EamA-like transporter family 21 143 IPR000620 GO:0016020|GO:0016021
Lan17g1220 381 Pfam EamA-like transporter family 206 343 IPR000620 GO:0016020|GO:0016021
Lan17g1220 381 PANTHER WAT1-RELATED PROTEIN 16 359 IPR030184 GO:0016021|GO:0022857
Lan17g1220 381 SUPERFAMILY Multidrug resistance efflux transporter EmrE 264 348 - -
Lan17g1220 381 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g1220 Lan-Chr17 20533197 20541931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g1220 101 362 Nodulin-like Gene Family AT5G45370 68.321 1.48e-128 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g1220 - - gmx:100809051 617.846