Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g1218 AACAATAACAATGGCACTTGGGTTGGTAATAATTGTAACTATAATCCTATTGGGGTATCTTATGATCCTTTCTTGCATTTGAATCTTCCAACACAACCAAGAAATGAACCTTTGTTTCAGTCTTTAGTATCTCATGGATATAATGTGCCAAGAAATGATTTTGTGTTTGGAGATGATATAGAAGGAAGTGGAATTGGTGCATTTCAAGGTTTTGAGAATGGGGTTATGGAGTTAAGTACTCATGATGTTGGAAAAAGGAGAAGAGGGAAAAGTACTAAGCAATTTACATCTACAACTGAGAGACAAAGGAGAGTGGATTTGGGTGGAAAATTTGATGCTTTGAAAGAACTCATTCCAAACCCTTCAAAGAGTGATAGAGCATCTGTGGTTGGAGATGCTATTGACTATATTAAGGAACTTCTAAGGACAGTGAAAGAGCTCAAAATATTGGTTGAGAAGAAAAGGTATGAGAAACAAAGGATGATGAAGAGACACAAGGTTGAAGAAGGTGATGTTTCCAATGAAGGGGACTTGATGATGAATGCAACTAATAACCATTCCTATAATGAAAGCTTAAGGAGTTCTTGGATCCAAAGGAAATCCAAAGATACTGAGATTGATGTGAGGATTATTGACAATGAAGTTACAATAAAGCTTGTTCAAAGGAAGAAAATCAATTGCTTGGTCTATGCCTCTCAAGTTCTTGATGAACTCAACCTGGATCTCCAACATGTTGCTGGTGGCCACATTGGTGATTTCAGCAGCTTTATGTTCAATAGCAAGATATGTGAAGGTTCCTCAGTTTATGCTAGTGCCATAGCCAACAAGCTTATTGATGTTATGGACAGAAATTTAGCAGCAGCTTGA 867 0.3714 NNNNGTWVGNNCNYNPIGVSYDPFLHLNLPTQPRNEPLFQSLVSHGYNVPRNDFVFGDDIEGSGIGAFQGFENGVMELSTHDVGKRRRGKSTKQFTSTTERQRRVDLGGKFDALKELIPNPSKSDRASVVGDAIDYIKELLRTVKELKILVEKKRYEKQRMMKRHKVEEGDVSNEGDLMMNATNNHSYNESLRSSWIQRKSKDTEIDVRIIDNEVTIKLVQRKKINCLVYASQVLDELNLDLQHVAGGHIGDFSSFMFNSKICEGSSVYASAIANKLIDVMDRNLAAA* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g1218 288 Pfam Helix-loop-helix DNA-binding domain 97 140 IPR011598 GO:0046983
Lan17g1218 288 PANTHER TRANSCRIPTION FACTOR BHLH91 18 287 - -
Lan17g1218 288 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 91 140 IPR011598 GO:0046983
Lan17g1218 288 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 90 163 IPR036638 GO:0046983
Lan17g1218 288 SMART finulus 97 146 IPR011598 GO:0046983
Lan17g1218 288 PANTHER TRANSCRIPTION FACTOR BHLH91 18 287 IPR045895 GO:0006355|GO:0048658
Lan17g1218 288 Gene3D - 82 162 IPR036638 GO:0046983
Lan17g1218 288 Coils Coil 137 157 - -
Lan17g1218 288 MobiDBLite consensus disorder prediction 82 101 - -
Lan17g1218 288 CDD bHLH_AtMYC1_like 96 155 IPR045896 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g1218 Lan-Chr17 20524753 20526720 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g1218 18 288 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31220 47.157 2.26e-74 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lan17g1218 HLH 3.2e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g1218 - - lang:109330962 571.622