Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g1217 TTCCCACCACCACCTCCACCACCACCACCACCACCTCCTCCACCACCTTCTCCCGGAGGAGCTTTAAAAGTACCCAAACCTGAACCATTCGATGAATTCCTCACCCCACACCATGACTCCGAAGTAGAAGAAGACGATGCCGAAAAGCAGCTTCAACTTTACTCTGACTTCTGTCGAGTCTCCAATCTCTTCCGTGAAGCATTCGGTAAAACACTTCACCAACAATTCGGGAGTGATGATGATTTTCACTATGACCTTGATTCTCACCTTGTTGATGTTAAGGTTTCAGTTTCTGATCCAATTTTGGAGAATGGTTTTGATGATTTGAATTTCCCGGTTTTAAATTCAAACCATGTAGACCCCAATGCAGGTGCAATTGTTGCAGTGAGTTCACCTCAGGGTCAGGCTGTTGAGGTAACCACCACGCCGAGGCGAAAGCCGAACCGAATGAAGGAGCTCATGAGGGCGATGGATCTTGGAGTGAAGGATCAGGTGCATTTCAGGGAGGTGGTGAGGAAGACTAGGATGGTTTATGAGTCGATTCGTGTCGTGACGTCGATTGAGGATGAGAAAAGAGTGGCTGCTGCTGTTGAAGAGAAGAAGAGAGTGATTGCTGCTATGGCTGCTGCAGGGAGTGGAGAGATAGAAGGAAGTGGCAGCAAGAGTTATAGGAGGCCGCGTCTTCGAGGGGACTTGAGGGCAGCCTCGTTGATGAGGGATCAAGGTTTGTGGCTGAACCGCGATAAGCGGATAGTTGGCGCGATTCCAGGTATAGATGTTGGTGATGTTTTCTTGTTTAGGATGGAATTGTGTGTTCTCGGGTTGCATGGTCAGATACAGGCTGGGATTGATTACCTTCCTGGTAGTATGAGCTCCAATGGCGAGCCGATAGCTACTAGTGTTATTGTTTCGGGTGGTTACGAGGACGACTTGGATGATGGTGAAGTTATAGTGTACACTGGTCAAGGTGGGCAAGAGAAGAATTCTTATAGACATGCTTCTCATCAGAAGTTGGAGGGAGGGAACCTTGCACTGGAAAGGAGTATGCATTATGGGATTGAGGTGCGAGTCATTCGCGGGGTGAGGTACGAAGGAAGTGCATCGTCGTCCGGTAAGGTTTATGTTTATGATGGATTGTATAAGATTGTTGATTGCTGGTTTGATGTGGGGAGATCTGGTTTTGGAGTTTATAAGTATAAACTTCGGAGAATCGAAGGGCAAGAGAAGATGGGTAGTGCTATTCTTAAAGAAGCTAGGGATGTTAGGAGGAGTGGAATTGATTTCAATCCCATGCATTGTCTCTCTGTAGATATTTCAAACAGTAAGGAGAATTTCCCTGTCCGGCTTTTTAATGACATAGATGACAATCGGGATCCTCTTTGTTTTGAGTATATTACCAAGACTACTTTTCCTCAATTTGTGTTCCATCAAAGTGGGAAGGCCACTGGTTGTGATTGCGTGGACGGTTGCGCTCATGACTGCTTTTGCTTTATGAAAAATGGAAGTGAGTTTCCATATAATCAACATGGGCGTCTCGTCCGAGGGAAGCCTTTGATTTTTGAATGTGGACCATTTTGCCGTTGTCCTCCTCATTGCCGCAATCGTGTTACACAAAAGGGGCCAAAGAATAGGTTGGAAGTGTTTAGGTCTACACAGACAGGTTGGGGAGTTAGGTCCTTGGACCTTATTCATGCTGGTGCTTTTATCTGTGAGTATGCAGGGGTTATTTTGACTAGGGAGCAAGCACAAATTTTGACAATGAATGGTTGCGATTCATCGATACATCCTAATCAATTTTCTAAGAGATGGGCCGAATGGGGGGATATATCTCAGATATACTCTGATTATGTCCGTCCATCACATCCATCAGTTCCTCCTTTAGATTTTTCTCTTGATGTGTCAACAATGAGGAATATTGCTTGCTATATGAGCCATAGTTCAACCCCAAATGTGTTTGTTCAGTTTGTTCTGTATGATCATAACAATTTGATGTTCCCTCACATTATGATATTTGCGTTGGAGAACATCCCTCCGATGAGAGAGCTCAGCCTTGATTACGGGGTAGCGGACGAGTGTACAGGCAAGCTCTCCATATGTAACTGA 2103 0.4536 FPPPPPPPPPPPPPPPSPGGALKVPKPEPFDEFLTPHHDSEVEEDDAEKQLQLYSDFCRVSNLFREAFGKTLHQQFGSDDDFHYDLDSHLVDVKVSVSDPILENGFDDLNFPVLNSNHVDPNAGAIVAVSSPQGQAVEVTTTPRRKPNRMKELMRAMDLGVKDQVHFREVVRKTRMVYESIRVVTSIEDEKRVAAAVEEKKRVIAAMAAAGSGEIEGSGSKSYRRPRLRGDLRAASLMRDQGLWLNRDKRIVGAIPGIDVGDVFLFRMELCVLGLHGQIQAGIDYLPGSMSSNGEPIATSVIVSGGYEDDLDDGEVIVYTGQGGQEKNSYRHASHQKLEGGNLALERSMHYGIEVRVIRGVRYEGSASSSGKVYVYDGLYKIVDCWFDVGRSGFGVYKYKLRRIEGQEKMGSAILKEARDVRRSGIDFNPMHCLSVDISNSKENFPVRLFNDIDDNRDPLCFEYITKTTFPQFVFHQSGKATGCDCVDGCAHDCFCFMKNGSEFPYNQHGRLVRGKPLIFECGPFCRCPPHCRNRVTQKGPKNRLEVFRSTQTGWGVRSLDLIHAGAFICEYAGVILTREQAQILTMNGCDSSIHPNQFSKRWAEWGDISQIYSDYVRPSHPSVPPLDFSLDVSTMRNIACYMSHSSTPNVFVQFVLYDHNNLMFPHIMIFALENIPPMRELSLDYGVADECTGKLSICN* 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g1217 700 SUPERFAMILY PUA domain-like 234 416 IPR015947 -
Lan17g1217 700 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE FAMILY MEMBER SUVH2-RELATED 20 697 - -
Lan17g1217 700 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 74 700 IPR025794 GO:0016571
Lan17g1217 700 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 20 697 - -
Lan17g1217 700 SUPERFAMILY Formin homology 2 domain (FH2 domain) 6 13 - -
Lan17g1217 700 SMART set_7 543 693 IPR001214 GO:0005515
Lan17g1217 700 MobiDBLite consensus disorder prediction 1 23 - -
Lan17g1217 700 Pfam SET domain 554 687 IPR001214 GO:0005515
Lan17g1217 700 ProSiteProfiles YDG domain profile. 253 403 IPR003105 -
Lan17g1217 700 SUPERFAMILY SET domain 429 688 IPR046341 -
Lan17g1217 700 Pfam SAD/SRA domain 252 407 IPR003105 -
Lan17g1217 700 Gene3D SET domain 412 700 IPR046341 -
Lan17g1217 700 Gene3D - 250 411 IPR036987 -
Lan17g1217 700 Pfam Pre-SET motif 438 535 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lan17g1217 700 MobiDBLite consensus disorder prediction 1 41 - -
Lan17g1217 700 SMART preset_2 435 527 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lan17g1217 700 ProSiteProfiles Pre-SET domain profile. 482 540 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lan17g1217 700 ProSiteProfiles SET domain profile. 543 687 IPR001214 GO:0005515
Lan17g1217 700 SMART G9a_1 248 407 IPR003105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g1217 Lan-Chr17 20521432 20523830 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g1217 137 689 Su(var)3-9 homologs AT5G04940 36.427 3.67e-103 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lan17g1217 SAD_SRA 5.3e-48 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g1217 K11420 - gmx:100785015 912.524