Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g1209 ATGGGTAGCAGTGACTTGGATAAATCTCCAAAAGAGAAGGAGCCAAAGGCGCCTCCTCCAGCTATGTCACAGGTGCAGACTGCAAACGGCTCTGGACCGATTAATCCTGACTGGTCTAGCTATCAGGCATATTCTCCTTTACCTCCACACGGATTCGTAGCATCAAGTCCCCAAGCTCACCCATATATGTGGGGTGTGCAGCATATTATGCCTCCCTATGGTACCCCACCACATCCATATGTTGCAATGTATCCCCATGGTGGCGTGTATGGTCATCCATCCATTCCTCCGGGATCTTATCCTTTTAGCCCTTTCACCATGCAGTCTCCGAATGGTACTGCTGATACTTCAGGAAATACTGCTGTCAGCGTGGAAGCTAATGATAAGCTTCCTGAAGTGAAGAACAAATTACCAATCAAAAGATCAAAAGGAAGTTTGGGTAGTTTGAATATGATTACTGGAAAAAACAATGAACCTTGTAAAACACCAGGAACATCTGCAAATGGAATTAATTCCAAAAGTTGTGGGAGTGCAAGTGAAGGTACTAGTGAAGGAAGTGACGAAAATTCTCAATGTGACTCTCAATTGAAATCTGGGGAGAGGCATGATTCTTTTGAAGATGAACCATCTCAAAATGGTAGTTCAGTGCATGCTCATAACCAAACTATGTCTATTGTGCCTACCTCTGCTGATGGTGCTCATGGGGCAGTTCCTGGTCCTACAACTAATTTAAATATAGGAATGGATTATTGGGGTACACCAATTTCATCCACTATTCCTGCGCTGCATGGAAAGGTTCCTTCTACAGCAGTTTCTGGAGGGATGGTTGCTGCTGGGTCACGGGATAGTGTCCACTCACAACCTTGGCTACAGGATGATAGAGAGCTGAAAAGACAAAAGCGGAAGCAGTCTAACAGGGAATCTGCTCGCAGATCCAGGTTGCGCAAGCAGGCCGAATGTGATGAACTAGCTCAGCGTGCTGAGGCTTTGAAAGAAGAAAATGCTTCTCTCCGTTCAGAATTGAGCCGGATCAGCATGGAGTATGAACAACTAATCTCTGAGAATACAGCCCTCAAGGAGCAACTTGGAGAAGCACCGGAAAACGAGAATCTTAGGTCCAGCCGTGATGATCAGCCTGTGGGTAATGAGTAA 1152 0.4566 MGSSDLDKSPKEKEPKAPPPAMSQVQTANGSGPINPDWSSYQAYSPLPPHGFVASSPQAHPYMWGVQHIMPPYGTPPHPYVAMYPHGGVYGHPSIPPGSYPFSPFTMQSPNGTADTSGNTAVSVEANDKLPEVKNKLPIKRSKGSLGSLNMITGKNNEPCKTPGTSANGINSKSCGSASEGTSEGSDENSQCDSQLKSGERHDSFEDEPSQNGSSVHAHNQTMSIVPTSADGAHGAVPGPTTNLNIGMDYWGTPISSTIPALHGKVPSTAVSGGMVAAGSRDSVHSQPWLQDDRELKRQKRKQSNRESARRSRLRKQAECDELAQRAEALKEENASLRSELSRISMEYEQLISENTALKEQLGEAPENENLRSSRDDQPVGNE* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g1209 383 Pfam bZIP transcription factor 294 355 IPR004827 GO:0003700|GO:0006355
Lan17g1209 383 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 295 358 IPR004827 GO:0003700|GO:0006355
Lan17g1209 383 MobiDBLite consensus disorder prediction 194 208 - -
Lan17g1209 383 MobiDBLite consensus disorder prediction 1 15 - -
Lan17g1209 383 MobiDBLite consensus disorder prediction 293 319 - -
Lan17g1209 383 MobiDBLite consensus disorder prediction 146 193 - -
Lan17g1209 383 Pfam Disordered region downstream of MFMR 136 260 - -
Lan17g1209 383 Gene3D - 296 348 - -
Lan17g1209 383 MobiDBLite consensus disorder prediction 355 383 - -
Lan17g1209 383 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 300 315 IPR004827 GO:0003700|GO:0006355
Lan17g1209 383 MobiDBLite consensus disorder prediction 1 41 - -
Lan17g1209 383 MobiDBLite consensus disorder prediction 141 218 - -
Lan17g1209 383 CDD bZIP_plant_GBF1 298 348 IPR045314 GO:0003700|GO:0006355
Lan17g1209 383 SUPERFAMILY Leucine zipper domain 296 352 IPR046347 GO:0003700|GO:0006355
Lan17g1209 383 Coils Coil 313 361 - -
Lan17g1209 383 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 382 IPR044827 GO:0003700|GO:0006355|GO:0043565
Lan17g1209 383 SMART brlzneu 293 357 IPR004827 GO:0003700|GO:0006355
Lan17g1209 383 MobiDBLite consensus disorder prediction 22 41 - -
Lan17g1209 383 PANTHER BZIP TRANSCRIPTION FACTOR FAMILY PROTEIN 1 382 - -
Lan17g1209 383 Pfam G-box binding protein MFMR 1 96 IPR012900 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g1209 Lan-Chr17 20408994 20416065 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g1209 1 378 bZIP Transcription Factor Family AT2G35530 61.168 2.17e-153 437
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lan17g1209 MFMR_assoc 4e-45 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g1209 K09060 - gmx:100101912 576.244