Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g1199 ATGCCTCCTCCACCATCCGCTTCACATTCACATCCATCTCCATATTCCACAACCTCAATGGTAAGATATACCAACAAAGAAGAAGGGGAAGAAAACAATGCAAGTCGCCATGCATGTGCTGCTTGTAGGCATCTAAAGAAAAAGTGCAAGAAAGATTGTGTTCTTGCTCCTTATTTTCCTACGGAAAAGACCAAACAGTACTTTATAGTGCACAAGGTTCTTGGGTACAACATCATGACCAAGATGCTTAGCAATCTTGTTGAGCAAGAAAGAAATGAAGCAGTTGAATCTTTCCAATGGGAAGCTATGATGTGGTAG 318 0.4119 MPPPPSASHSHPSPYSTTSMVRYTNKEEGEENNASRHACAACRHLKKKCKKDCVLAPYFPTEKTKQYFIVHKVLGYNIMTKMLSNLVEQERNEAVESFQWEAMMW* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g1199 105 Pfam Lateral organ boundaries (LOB) domain 38 105 IPR004883 -
Lan17g1199 105 MobiDBLite consensus disorder prediction 1 35 - -
Lan17g1199 105 ProSiteProfiles LOB domain profile. 37 105 IPR004883 -
Lan17g1199 105 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 35 105 - -
Lan17g1199 105 PANTHER LOB DOMAIN-CONTAINING PROTEIN 5-RELATED 35 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g1199 Lan-Chr17 20295475 20295792 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g1199 37 103 AS2 family AT1G06280 44.776 8.35e-19 75.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lan17g1199 LOB 7e-21 No_clan