Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g1196 ATGGCTACTCAAAACGGTTCCAAACTAGATCCCCAAACCCTCATCCGTTCCTGCGCCTCCTTTCTTGCCTGCCGTGATTTTAATGCGTGTCGTGAGCTCGCTCATTCTATCCCCAGATTAGATACTAACATTATCGTTCAAGTTGACCAAATCTTAACAATTGTTCACGTCCTTTGTGCGGCTGAACGCCGAATTAGTGATACTAACCTCGATTGGTATTCTATTCTCCGGCTTCGCCGTGAGGATTCAGCTAATCGTGACTTAGTGCGGCAGCAATTTAAGGATCTCATGCGTCTCCTTAACCCTAATACTAACAAGTTTCCCTTTGCGGATGACGCGCTAATGCGTGTCCGTGAGGGTTGGTTTGTGATATCTGACTCGGCTAGGAGAGCCTCATTTGACCGTGAGATTGATGAGGAAATGAAGAAGGGGGCATCGTTTTGGACCATGTGTCCTTATTGTTGGTATCTGCACGAGTATGAGAGGAAATATGAGGATTGTACTTTTCGATGTGGAAACTGTGGGAAGACGTTTCATGGCGTGGAGGTGAAGCCGCCGACAAAGGATATGATGGTGGAGGGGAAGGAGCAGTACTATTGCTATCAGGTGAGTTTGCCTTGTAGGTATCCCGTAGACGAGAACATTAGGGATTCAAATGGTGGAATAGGTTCACAGAGCAATGGGAAAAGGAGGATGAGAATTAAAACTTTGGCTAGGAGGGTTAAAATGAAAGGGTTTATCGAAGCAAATAGTGACGACACCGATCCGGATGTAGAACAAGAAGGTGTGTTGTAG 795 0.4604 MATQNGSKLDPQTLIRSCASFLACRDFNACRELAHSIPRLDTNIIVQVDQILTIVHVLCAAERRISDTNLDWYSILRLRREDSANRDLVRQQFKDLMRLLNPNTNKFPFADDALMRVREGWFVISDSARRASFDREIDEEMKKGASFWTMCPYCWYLHEYERKYEDCTFRCGNCGKTFHGVEVKPPTKDMMVEGKEQYYCYQVSLPCRYPVDENIRDSNGGIGSQSNGKRRMRIKTLARRVKMKGFIEANSDDTDPDVEQEGVL* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g1196 264 SUPERFAMILY Chaperone J-domain 65 137 IPR036869 -
Lan17g1196 264 ProSiteProfiles dnaJ domain profile. 71 137 IPR001623 -
Lan17g1196 264 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 12 258 - -
Lan17g1196 264 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 12 258 - -
Lan17g1196 264 Gene3D DnaJ domain 65 148 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g1196 Lan-Chr17 20269144 20270356 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g1196 1 249 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 30.258 1.03e-36 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g1196 - - gmx:102659715 291.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0571 17 4696257 4697586 Lan17g1196 17 20269144 20270356 PCT
Lan18g0729 18 12632777 12634893 Lan17g1196 17 20269144 20270356 PCT
Lan6g0548 6 4795182 4796204 Lan17g1196 17 20269144 20270356 PCT
Lan17g1196 17 20269144 20270356 Lan17g0571 17 4696257 4697586 PCT
Lan17g1196 17 20269144 20270356 Lan18g0729 18 12632777 12634893 PCT
Lan17g1196 17 20269144 20270356 Lan6g0548 6 4795182 4796204 PCT