Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g1187 ATGGCTTCTTCATCTCTTTTGCTTCTCTTCCTTTGTTCCCTTGCAACTATTGCAGTTTCTGACCCAAGAGCCACAAAAGCAGCTTTATTATGCACCAACAGAACTGCACCTATGCTTCACCGTGATGTTTTCATATCAAGTTTTTTAGCTTCCATGGATGCACTAACTCCTCTTATTTCATCACAAAGATATGGTGCAGTTGTTAATGGCACTGGAAACAACACTGTCTATGCTTTTAGTGAGTGTTTCAAAGATCTTTCTCAATCAGATTGTGATCTTTGTCTTGCACAAAGCAAGACTCAAATACTTAGTTGTCTTCCCTTTCAGAAAGGTACTCGTGGTGGAAGACTCTTCTTTGATGGCTGTTATCTCAGGTATGATGACTATAACTTCTTCAATGAGAGTCTAAGTGATCAAGACACAACTGTGTGTAACACCAGTGATTTTAAGGGTAATAGGAATGTTTATGGAGACAATGCTTTGGAGTTAGTGAGAAATTTGAGTGTGTTAGCACCAAGAAATGATGGGTTCTTTGTAGGGTCTGTGAATATAAGGAATGTAAGTGTTTATGGGTTGGCACAGTGTTGGAAAATTGTGAATGGAAGTGCCTGCATGAATTGTTTGGAAGATGCTGTTACAAAGATTGGTTCTTGTGTTCCAAGAGATGAAGGGAGAGCATTGAATGCTGGTTGTTACTTGAGATATTCGAACCAAAAGTTCTATAACAATTCAACCAATGATTCACCTGCCGGAGGAAATCGTGGACATCAAAAGCTAGCTATAATCCTGGCTGCTGCTTCTACCGCCGTGGCGCTTCTGGTGGTTGTTGCAACAGTTGTTTTCTTCGTAAAGAAGAATGTATTGAAGAAGAGAAGAGAAAAAAGACAATTTGGTGTACTTTTGGATAGAGTGAGCAAGTCCAAGCTAAATATGCCATATGAAATTCTTGAAAAAGCATCAAACTACTTCAATGAGGCCAATAAGCTAGGACAAGGGGGATCAGGTTCTGTTTATAAAGGAGTTCTTCCGGATGGAAATACCGTAGCAATTAAAAGGCTTAGCTTTATCACAACACAATGGGCAGATCATTTCTTCAATGAAGTCAATTTGATCAATGGAATTCATCACAAAAATCTTGTAAAGCTTTTGGGTTGCAGCATTACAGGACCTGAAAGCCTTCTTGTTTATGAATATGTACCTAATCAGAGCCTCCACGATCACCTTTCTGTCAGAAGGATTTCTCAACCATTGACTTGGGAAGTGAGGCATAAGATCATCTTAGGGGTTGCAGAGGGCATGGCCTATCTTCATGAGGATTCACCTGTGAGAATCATTCATAGGGATATAAAATTAAGCAACATTATGCTTGATGAGGACTTCACACCCAAGATTGCCGATTTTGGACTCGCTAGATTATTTCCAGAAGACAAGTCCCACATTAGCACAGCCATTGCTGGCACATTGGGTTATATGGCTCCGGAGTATATAGTTCGTGGTCAGTTGTCCGAGAAAGCAGATGTTTACAGCTTCGGAGTTCTAGTTGTCGAAATCGTATCTGGCAAAAGAAACAGTACCTTTGTTTTAAATTCATCCTCTATCCTACAAATGGCTTGGAGCCTCTATGGATCAAATAGGCTATCCGACATCGTTGATCCGGCCCTAGAGGGTAATTTTCGTCGAGAGGAAGCATGCGGATTGCTTCAAATAGGGTTGCTTTGTGCACAAGCATCTGCAGAGCTGAGACCATCAATGTCAGTAGTTGTTAAAATGATTAATGGCAATCATGAAATTCCTCAACCAACTCAACCACCATTTCTTCATTCGGTTAGTTCAGATCTAAGCAAATCTAGATATAATAATTTTCAACCTGGATCAAACACACCCTCTTCAGGGGACAACATGACTGAAAGTTTAATAGAGCCAAGATGA 1929 0.4023 MASSSLLLLFLCSLATIAVSDPRATKAALLCTNRTAPMLHRDVFISSFLASMDALTPLISSQRYGAVVNGTGNNTVYAFSECFKDLSQSDCDLCLAQSKTQILSCLPFQKGTRGGRLFFDGCYLRYDDYNFFNESLSDQDTTVCNTSDFKGNRNVYGDNALELVRNLSVLAPRNDGFFVGSVNIRNVSVYGLAQCWKIVNGSACMNCLEDAVTKIGSCVPRDEGRALNAGCYLRYSNQKFYNNSTNDSPAGGNRGHQKLAIILAAASTAVALLVVVATVVFFVKKNVLKKRREKRQFGVLLDRVSKSKLNMPYEILEKASNYFNEANKLGQGGSGSVYKGVLPDGNTVAIKRLSFITTQWADHFFNEVNLINGIHHKNLVKLLGCSITGPESLLVYEYVPNQSLHDHLSVRRISQPLTWEVRHKIILGVAEGMAYLHEDSPVRIIHRDIKLSNIMLDEDFTPKIADFGLARLFPEDKSHISTAIAGTLGYMAPEYIVRGQLSEKADVYSFGVLVVEIVSGKRNSTFVLNSSSILQMAWSLYGSNRLSDIVDPALEGNFRREEACGLLQIGLLCAQASAELRPSMSVVVKMINGNHEIPQPTQPPFLHSVSSDLSKSRYNNFQPGSNTPSSGDNMTESLIEPR* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g1187 642 ProSitePatterns Serine/Threonine protein kinases active-site signature. 444 456 IPR008271 GO:0004672|GO:0006468
Lan17g1187 642 CDD STKc_IRAK 329 593 - -
Lan17g1187 642 Gene3D - 30 131 IPR038408 -
Lan17g1187 642 Gene3D - 138 240 IPR038408 -
Lan17g1187 642 Gene3D Phosphorylase Kinase; domain 1 283 398 - -
Lan17g1187 642 SMART serkin_6 323 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g1187 642 ProSiteProfiles Gnk2-homologous domain profile. 26 131 IPR002902 -
Lan17g1187 642 ProSitePatterns Protein kinases ATP-binding region signature. 329 351 IPR017441 GO:0005524
Lan17g1187 642 SUPERFAMILY Protein kinase-like (PK-like) 309 616 IPR011009 -
Lan17g1187 642 ProSiteProfiles Gnk2-homologous domain profile. 137 240 IPR002902 -
Lan17g1187 642 MobiDBLite consensus disorder prediction 617 642 - -
Lan17g1187 642 Pfam Salt stress response/antifungal 144 238 IPR002902 -
Lan17g1187 642 Pfam Salt stress response/antifungal 46 129 IPR002902 -
Lan17g1187 642 Pfam Protein kinase domain 324 525 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g1187 642 MobiDBLite consensus disorder prediction 617 636 - -
Lan17g1187 642 ProSiteProfiles Protein kinase domain profile. 323 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g1187 642 Gene3D Transferase(Phosphotransferase) domain 1 399 601 - -
Lan17g1187 642 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 15 612 - -
Lan17g1187 642 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 15 612 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g1187 Lan-Chr17 20158886 20163728 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g1187 18 488 Receptor kinase-like Gene Family AT1G70530 63.136 0.0 627
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lan17g1187 Pkinase 1.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g1187 - - gmx:100787359 927.932