Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g1182 ATGGAGAACGATAATGAAACCAAAGGAAGAATAGAAGAAACGGTTCGGAAGATTCTGGAAGAATCAAACATGGACGAGGTTACCGAGTCAAAGATTCGCAAGCAGGCTTCGAAAGAACTCGCCATTGATTTATCACAACCCCACTTCAAAGCTTTTGTGAAGAAAGTAGTGGAAGCTTTTCTAGAAGAGAAGCATGAGCAACAACAACAGCTAGAAGAAGAGGAAGAAGAACGACGTGAAAGGGGTTCTAAGGATAAGGAGTATGATGATGATGGCGATCTTATCATCTGCAAGCTTTCGGATAAGAGAAGGGTGACCATTCAGGATTTCAGAGGTAAAACACTGGTCTCTATTCGGGAGTATTATAGAAAAGATGGCAAGGATCTCCCTTCTTCCAAAGGAATAAGTTTGACAGAGGAGCAATGGTCAACCTTTAAGAAAAATGTGCCTGCCATAGAAAACGCAATTAAGAAGTTGGAGTCGCGTGATATATAA 495 0.4121 MENDNETKGRIEETVRKILEESNMDEVTESKIRKQASKELAIDLSQPHFKAFVKKVVEAFLEEKHEQQQQLEEEEEERRERGSKDKEYDDDGDLIICKLSDKRRVTIQDFRGKTLVSIREYYRKDGKDLPSSKGISLTEEQWSTFKKNVPAIENAIKKLESRDI* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g1182 164 MobiDBLite consensus disorder prediction 64 90 - -
Lan17g1182 164 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR KELP 5 162 - -
Lan17g1182 164 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 5 162 IPR045125 GO:0003713|GO:0060261
Lan17g1182 164 Gene3D Transcriptional Coactivator Pc4; Chain A 86 162 IPR009044 GO:0003677|GO:0006355
Lan17g1182 164 PIRSF RNA_polymII_KELP 2 163 IPR017415 -
Lan17g1182 164 Pfam DEK C terminal domain 7 61 IPR014876 -
Lan17g1182 164 Coils Coil 57 84 - -
Lan17g1182 164 Pfam Transcriptional Coactivator p15 (PC4) 97 148 IPR003173 GO:0003677|GO:0006355
Lan17g1182 164 SUPERFAMILY ssDNA-binding transcriptional regulator domain 96 159 IPR009044 GO:0003677|GO:0006355
Lan17g1182 164 SUPERFAMILY DEK C-terminal domain 5 62 - -
Lan17g1182 164 Gene3D - 1 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g1182 Lan-Chr17 20039492 20042191 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Lan17g1182 DEK_C 1.8e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g1182 K25815 - gmx:100499671 233.032