Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g1158 ATGAGTGCAGTGGGAAGCCAGATAGCCCTTGATGCTAATGATGATGTAGCTAGGGCATACAAGCAACAACTGTACAATGAATCAAGGGAGCTTTTTGCTTCATTTCGTGTCTTCTGCAATCGAAAGAATATACAATGCCAAGAGGTATTGTTGGAGGACACAGATGTAACTAAGGCATTAATAGAAAGTGTTACAACATATTCCATTGAGCTTCTGGTACTTGGGGCACCATCAAAGAGTGGTCTTGTCAGAAGATTTAGGACAACGGATATTCCAAACTTGGTGTCAAAAGGGGCACCACCATTCTGCACTGTGTACATTATTTCCAAAGGAAAAATCTCAACTGTAAAATCTGCAACTGCTCCACTAACTACTAAAGCTACAATCCGTAACAATGCATCACAACCACAATATCAGCTTGCCCCTAGTCCTGAAAGAACGGATGCACAACTGATGCGCAACCATCTACCACGACCATCAACAGAGAAACCAATATATGGTGCACCCCGATTATCAGACGATGAAATCAGGTCACCCTTCACAAGAGCTGGTAAACCATATTACAAAGCGTACGAGTCCTCGATTCCTGATTCTGATATATCATTCGTCAGCAGTGGAAGGCCAAGTATTGACAGGATGTTCCCTTCATTTTATGATGAAATGGACTCTGGGAGGCTTTCATCGGGCTCAGATTATGATACCAGAAGCTATGGTTCATCTTTCTCAGGTGCTAAATCAATTGATCAGGGTGATTACTCGTTCTGTTCACAAGACAGCAGATTCTCAATGTCATCATCATCGAGGTTATCAATGTCGGATGATGTTGAAGCTGAAATGAGGAGACTGAAGTTAGAATTGAAGCAGACAATGGAAATGTACAGTACAGCTTGTAAGGAAGCTCTCACAGCAAAGCAAAAGGCAATGGAACTTCAGCATTGGAAATTAGAAGAACAAAGGAAAATGGAAGAGTCGCGAATGGTTGAAGAAGCGACATTGGCATCAGCTGAGAAGGAGAAAGCAAAATCTAAAGTTGCAATGGAAGCAGAAGAAGCAAACCAAAAAATTGCAGAATTAAAAGCACAACAAAGAATGAACAGAGAATCTGATGAGAAGAAGACAATGGATACTATTTCACATGCTCCTGTCAGGTACAGAAGGTACGATATCGAGGAAATCGAAGAAGCAACCAACAACTTTGCCCCCTCTCTCAAGATCGGCGAAGGAGGTTACGGGCCAGTATATAGGTGTGAACTAGATCACACACCAGTAGCAGTAAAAGTGCTAAAGCCAGATGCAGCTCAAGGACGGTCACAGTTTCAGCAAGAGGTTGAAGTGTTGAGTTGCATGAGACATCCAAACATGGTTCTGCTCCTTGGAGCTTGTCCTGAGTATGGTTGCCTAGTGTACGAGTACATGGCTAATGGAAGCTTGGATGACTGCCTCTTCAGGAGAGGTAAGTCACCAGCAATTCCTTGGCAGCTAAGATTCAGAATTGCTGCAGAAATCGCCACCGGCCTCAATTTCCTCCATCAGGCAAAGCCTGAACCACTGGTGCATCGTGACTTAAAACCTGGAAACATTCTTCTTGACCGCAACTTCGTGAGCAAGATCAGTGATGTTGGATTGGCCAGGCTTGTTCCTCCTTCGACCGCAGACACTGTGACACAGTATCGAATGACATCAACTGCCGGAACATTCTGTTACATTGATCCTGAGTACCAGCAAACAGGCATGTTGGGAATCAAGTCAGATGTGTACTCATTTGGGATAATGCTACTGCAGATCATAACAGCCAAGCCACCAATGGGGTTGACTCATCATGTTGGAAGGGCTATTGAGAAGGGTACTTTTGCTGAGATGCTTGACCCTGCAATTGAAGATTGGCCACTTGAACATGCTATGCATTTTGCTAAGCTCGCATTGCAGTGTGCAGAAATGAGAAAAAAAGATAGACCTGATCTTGGGAAAGTTGTATTGCCTGAGCTCAATAAACTAAGAGATTTCGCTGAAGAAAACTTGCCAATGATGATGATGTTTGGTGCAGGATTCGCTCCAAGAAACACTTATTCGCGTGCCGCATTTTTCTCATCCACGGTTCAAGATAATATGAGTGAATCTCAAATGTCTGGTATGTCCGGTTACGAAAGCCGCTCAAGCTCATCTTCACATAGTAATAATAACAGTTTTGTTGCAACAAGGATGATTTGA 2208 0.433 MSAVGSQIALDANDDVARAYKQQLYNESRELFASFRVFCNRKNIQCQEVLLEDTDVTKALIESVTTYSIELLVLGAPSKSGLVRRFRTTDIPNLVSKGAPPFCTVYIISKGKISTVKSATAPLTTKATIRNNASQPQYQLAPSPERTDAQLMRNHLPRPSTEKPIYGAPRLSDDEIRSPFTRAGKPYYKAYESSIPDSDISFVSSGRPSIDRMFPSFYDEMDSGRLSSGSDYDTRSYGSSFSGAKSIDQGDYSFCSQDSRFSMSSSSRLSMSDDVEAEMRRLKLELKQTMEMYSTACKEALTAKQKAMELQHWKLEEQRKMEESRMVEEATLASAEKEKAKSKVAMEAEEANQKIAELKAQQRMNRESDEKKTMDTISHAPVRYRRYDIEEIEEATNNFAPSLKIGEGGYGPVYRCELDHTPVAVKVLKPDAAQGRSQFQQEVEVLSCMRHPNMVLLLGACPEYGCLVYEYMANGSLDDCLFRRGKSPAIPWQLRFRIAAEIATGLNFLHQAKPEPLVHRDLKPGNILLDRNFVSKISDVGLARLVPPSTADTVTQYRMTSTAGTFCYIDPEYQQTGMLGIKSDVYSFGIMLLQIITAKPPMGLTHHVGRAIEKGTFAEMLDPAIEDWPLEHAMHFAKLALQCAEMRKKDRPDLGKVVLPELNKLRDFAEENLPMMMMFGAGFAPRNTYSRAAFFSSTVQDNMSESQMSGMSGYESRSSSSSHSNNNSFVATRMI* 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g1158 735 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 13 87 - -
Lan17g1158 735 PANTHER OS02G0152300 PROTEIN 9 723 - -
Lan17g1158 735 ProSitePatterns Serine/Threonine protein kinases active-site signature. 517 529 IPR008271 GO:0004672|GO:0006468
Lan17g1158 735 Gene3D Transferase(Phosphotransferase) domain 1 472 675 - -
Lan17g1158 735 Coils Coil 272 292 - -
Lan17g1158 735 Gene3D Phosphorylase Kinase; domain 1 376 471 - -
Lan17g1158 735 MobiDBLite consensus disorder prediction 156 177 - -
Lan17g1158 735 Coils Coil 332 368 - -
Lan17g1158 735 CDD STK_N 11 111 - -
Lan17g1158 735 SUPERFAMILY Protein kinase-like (PK-like) 376 658 IPR011009 -
Lan17g1158 735 Pfam Protein tyrosine and serine/threonine kinase 404 657 IPR001245 GO:0004672|GO:0006468
Lan17g1158 735 SMART serkin_6 399 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g1158 735 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 9 723 - -
Lan17g1158 735 MobiDBLite consensus disorder prediction 705 735 - -
Lan17g1158 735 ProSiteProfiles Protein kinase domain profile. 399 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g1158 Lan-Chr17 19438170 19442203 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g1158 30 673 Receptor kinase-like Gene Family AT5G35380 61.077 0.0 744
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Lan17g1158 PK_Tyr_Ser-Thr 5.8e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g1158 - - gmx:100803837 1056.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g1158 17 19438170 19442203 Lan6g1186 6 11950955 11955710 LSH