Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g1156 ATGGAGAGAGAAAACGGAGACGCGTGTAAGCGATTTCCATGTCATGGTGGAAAAAGCTTATTGACCGTTGCTGCTATTAGGAAGAAGCATTTACAGAAAGAGATGAACGTTAATGGAACTTCTTCTTCGTGTTCTGGAAGGAATAGTAAGCGTAACGGTTTTCAGGAGCAGTTATTAACAGAAGATTATGCTTCAAATAATGTGTTCCGTGATTTTGATTTTCTACCTTCTGGGCCCAAAAATTATGTTCCTTATTGTCCAGAGAACCAAGGACCCACCAAAAGGAAGAAGGTTTCCAAGAGTGCAATTGTGAGTCATCCTGATTGTAATATGGAAGTGCCTGTGAAGAAACATGGTCGTGGAAAGGGTTTGATGACAGTTTGGAGGGCAGCAAATCCTGATGCTGGTGACCTTCCAATTGGATATAGTTTGTCCGACCTAGAAGTTCGTCTAACCTCTAATTCTATTCTACAGAAACCACTCTCTGATAACAAGAGGTCACGAAAAACAGTAACCACAAATGTAAATCTTAATGATTGTTTTATTCAGAATAAGAGAAATAAATTACAGGATAAGAGGAATCTTGCAATTCAAAGAAGAGTGGGGGAATCTAACCAATATGTAAGTCAAATCCAGCCACCGAAGGAAAAATGTGATCTTGCTTTGGATAGTGCAATATCTACAGAGGTAGTTAATCGAATTTCGATGTTAATCGATGATGAAGAGCTAGAGCTGAGAGAGCTACAAGCTGGGAATGACTTGCTTATGTGTTCTGATCATCTTGCTACCAGTGGAATGTTTGGCTGCTCACTTTGTAAAGATGTGCTAGTTAAGTTCCCCCCGGATACTGTCAAGATGAAGAAACCTATCTGTTTGCAACCTTGGGACTCCTCTCCAGAAATTGTGAAGAAATTATTTAAGGTTTTCCATTTCCTCTATACATATGCAATAGTTGTTGATACATGCCCCTTCACTCTTGACGAGTTTGTTCAAGCATTCCATGATAGGGACTCAATGTTACTTGGAAAGATTCATGTGGCCCTTCTTACTGTTCTTCTATCTGACATTGAAGTGGAACTTACTAATGGGTTTTCACCTCATTTAAATAAGTCATGCAATTTTCTTGCACTGCTTCACTCGGTTGAAAGTCAAGAATGTTCCTTGAATTTCTGGAGAAGATCGCTTAATCCTCTTAGTTGGATTGAAATACTTCGACAAGTTCTGGTTGCTTCTGGATTTGGTTCAAAGCAACGTGCTTTACACAGAGAGACCCTTAGCAAGGAACTGAATCTTCTTGTAAACTATGGCCTACGCCCTGCAACCTTGAAGGGTGAGTTGTTTAAAATCTTGTTAGAGCGAGGAAATGATGGATGCAAAGTATCCGAGCTAGCAAAGTCAATGCAGATTGCAGAATTAGACCTTGTCAGCACAACAGAGGAGCTGGAGTCCTTGATATACTCGACACTTTCTAGTGATGTTACCTTATTTGAAAAGATTTCATCATCGGCATATCGATTGCGTATGAGCACTGTTACAAAGGACAGTGATGAATGTGAGTCAGATATGGATGACTTTGGGAGTGTTGATGATGAACTTAATGACAGTGATTCATGTAGCAGTGGTGATGATTTTGCAAGTGATTCAAGAATCTCCAATAAAAGAAAACTGAAAGTGCACACTGAAATTGATGAGAGCCATCCAGGGGAAGTGTGGTTGTTAGGACTTATGGACAGTGAGTATTCAGATTTGAACATTGAAGAAAAATTGAATGCATTGGTGGCTCTAACTGATCTTCTTTCATCTGGATCCAGCATCAGGATGAAGGATCCAATGAATGTTACAGCTGATTGCAATTCTAGCATCCCATTATGTGGTTCAGGAGCAAAAATAAAGAGATCGGTAGTGAAGAAGCCTGGGCCATTTTGTAACCAGACTGCACAAATGCAACATGTTAAAGATGCACACTGTATTTTTCATCCAAGTCCAGTAGATTCCTCATCATTAAACTCAAATGTTAATAATCATGAGGGTTCCTCTGAGCAGGGAATAGATTCAAGTGGTTCACATCCCATTCAATCACTGTTTTTGGGATCTGATCGTAGGTACAATAGATATTGGCTTTTCTTGGGCCCTTGCAATGCAGATGATCCTGGCCACTGGAGGGTTTACTTTGAATCTTCTGAGGATGGTCACTGGGAGGTGATTGATACTGCAGAGGCCTTGTGTGCCTTGGTGTCAGTACTAGATGATAGAGGGAAACGGGAGGCTTTTCTTATTGAATCTTTGGAGAGACGGCAAGCACCTCTATGCAGATCTATGTCTAGGGTTAAGGTTAATTGTACTGGAATTAGGTGTATGTCAAGTTCTGATCAATCTGAGCAGGATATGGTTACAGAAGACAGTTACTCTCCTATATCTGATGTAGACAATCTGAATCTGACTGAGACTGCCCAAGACTCTTTGTCTTCAGCTGGGGCTGTGGTAATTGCAGCTGGAAAGAAGGGAGAGGAACAAGTGCAAAAATGGCTCCGTATTCAAGAATATGATTCTTGGATTTGGAGTTCCTTTTATTTAGATCTCAATGTTGTAAAATATGGTAGAAGGTCATATCTTGACTCCCTAGCCAGATGTAAGAGTTGTCATGATCTTTACTGGAGAGATGAGAGACACTGCAAAATTTGCCACATGACATTTGAGCTTGATTTTGATCTAGAAGAAAGGTACGCAGTCCACATAGCCACATGCAAGGAGAAAGAAGACAACAATATATTTCCAAATCAGAAAGTCTTGTCATCACAGATTCAATCACTGAAAGCTGCAATATATGCTATTGAGTCTGTTATGCCTGAAGATGCCCTGGTGGGTGCTTGGAGGAAGTCTGCTCATAAGCTCTGGGTCAAACGACTCAGACGCACCTCAACTTTAGTGGAGCTTATGCAGGTTCTTGCTGATTTTGTTGGTGCCATCAACAAGGACTGGTTGTTTAAATGCCAGTTTCCTGATGGTGTGGTTGAAGAAATCATTGCATCTTTTGCATCTATGCCCCATACATCATCTGCCCTTGCTCTATGGTTAGTAAAGTTAGATGTCATAATTGCTCCCTACCTGGACCGAGTCCATCCTCAGAAGAAGCAAGGAATCAGTAAGCATGGTGCTTGCTGA 3162 0.4083 MERENGDACKRFPCHGGKSLLTVAAIRKKHLQKEMNVNGTSSSCSGRNSKRNGFQEQLLTEDYASNNVFRDFDFLPSGPKNYVPYCPENQGPTKRKKVSKSAIVSHPDCNMEVPVKKHGRGKGLMTVWRAANPDAGDLPIGYSLSDLEVRLTSNSILQKPLSDNKRSRKTVTTNVNLNDCFIQNKRNKLQDKRNLAIQRRVGESNQYVSQIQPPKEKCDLALDSAISTEVVNRISMLIDDEELELRELQAGNDLLMCSDHLATSGMFGCSLCKDVLVKFPPDTVKMKKPICLQPWDSSPEIVKKLFKVFHFLYTYAIVVDTCPFTLDEFVQAFHDRDSMLLGKIHVALLTVLLSDIEVELTNGFSPHLNKSCNFLALLHSVESQECSLNFWRRSLNPLSWIEILRQVLVASGFGSKQRALHRETLSKELNLLVNYGLRPATLKGELFKILLERGNDGCKVSELAKSMQIAELDLVSTTEELESLIYSTLSSDVTLFEKISSSAYRLRMSTVTKDSDECESDMDDFGSVDDELNDSDSCSSGDDFASDSRISNKRKLKVHTEIDESHPGEVWLLGLMDSEYSDLNIEEKLNALVALTDLLSSGSSIRMKDPMNVTADCNSSIPLCGSGAKIKRSVVKKPGPFCNQTAQMQHVKDAHCIFHPSPVDSSSLNSNVNNHEGSSEQGIDSSGSHPIQSLFLGSDRRYNRYWLFLGPCNADDPGHWRVYFESSEDGHWEVIDTAEALCALVSVLDDRGKREAFLIESLERRQAPLCRSMSRVKVNCTGIRCMSSSDQSEQDMVTEDSYSPISDVDNLNLTETAQDSLSSAGAVVIAAGKKGEEQVQKWLRIQEYDSWIWSSFYLDLNVVKYGRRSYLDSLARCKSCHDLYWRDERHCKICHMTFELDFDLEERYAVHIATCKEKEDNNIFPNQKVLSSQIQSLKAAIYAIESVMPEDALVGAWRKSAHKLWVKRLRRTSTLVELMQVLADFVGAINKDWLFKCQFPDGVVEEIIASFASMPHTSSALALWLVKLDVIIAPYLDRVHPQKKQGISKHGAC* 1054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g1156 1053 ProSiteProfiles DDT domain profile. 299 358 IPR018501 -
Lan17g1156 1053 MobiDBLite consensus disorder prediction 517 537 - -
Lan17g1156 1053 PANTHER OS07G0619600 PROTEIN 42 1045 - -
Lan17g1156 1053 SMART testlast3 299 358 IPR018501 -
Lan17g1156 1053 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 42 1045 IPR044977 GO:0006357
Lan17g1156 1053 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 567 606 IPR028942 -
Lan17g1156 1053 MobiDBLite consensus disorder prediction 667 686 - -
Lan17g1156 1053 MobiDBLite consensus disorder prediction 517 545 - -
Lan17g1156 1053 Pfam DDT domain 302 355 IPR018501 -
Lan17g1156 1053 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 692 765 IPR028941 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g1156 Lan-Chr17 19390381 19402229 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g1156 220 524 Homeobox Transcription Factor Family AT1G28420 32.081 2.30e-42 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Lan17g1156 WSD 3.5e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g1156 - - aprc:113853612 1555.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g1156 17 19390381 19402229 Lan6g1183 6 11912950 11923778 LSH