Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g1149 ATGGTGAAGTGTTCACATTGTGGAAACATAGGCCACAATTCAAGGACCTGCACATCTTTCAAAGATTTAGGATTTCGCCTCTTTGGTGTGCAACTACACATGTCTTCATCATCTTTTGGTGTTACCATTAAGAAAAGCTTTACCATGGAGTCTTTGCCTTCAATATCGTACTCTCAATATTTCTCATTTCCTTCATCAAGAATAACCATTGATGAAAACTCTGATGGAGCCTCTATTGGGTATCTCTCAGATGGTCTCATAGGTCGACCCCAAGAGAGGAAGAAAGGAGTAGCATGGACAGAAAAGGAGCATCTAACATTCCTTATTGGACTTGAGAAGCTGGGAAAAGGTGATTGGAGAGGTATCTCTAGAAACTTTGTGACAACCAGAACCCCAACCCAAGTAGCCAGCCATGCTCAGAAGTACTTTCTTCGAATGACAACTTTAAATAAGAAGAAGCAACGTTCAAGTCTCTTTGACATGGTACGCAGCAATTCTGATTGCAACCTTGGAGATTCAGTTTCTACCCATCAACAGTATAAGCCTAAATCTGAATTTGAGAATGATGCCACTATGTCATTGCTTACTAACTTTCAACATAAGAATGAAAAAAATTCTGATGAGTACTCTAAAGTTCAACCAGTTGCAGAACATGAAGGTTTGGTGCTCACTCTTGCAGTCCCTAAAGCTAAGGCTAAAATCCCAGAATAA 711 0.3994 MVKCSHCGNIGHNSRTCTSFKDLGFRLFGVQLHMSSSSFGVTIKKSFTMESLPSISYSQYFSFPSSRITIDENSDGASIGYLSDGLIGRPQERKKGVAWTEKEHLTFLIGLEKLGKGDWRGISRNFVTTRTPTQVASHAQKYFLRMTTLNKKKQRSSLFDMVRSNSDCNLGDSVSTHQQYKPKSEFENDATMSLLTNFQHKNEKNSDEYSKVQPVAEHEGLVLTLAVPKAKAKIPE* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g1149 236 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 91 147 IPR017930 -
Lan17g1149 236 CDD SANT 98 143 IPR001005 -
Lan17g1149 236 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 94 145 IPR006447 GO:0003677
Lan17g1149 236 SUPERFAMILY Homeodomain-like 92 147 IPR009057 -
Lan17g1149 236 Pfam Myb-like DNA-binding domain 98 143 IPR001005 -
Lan17g1149 236 PANTHER TRANSCRIPTION FACTOR MYB1R1-LIKE ISOFORM X1 3 212 - -
Lan17g1149 236 Gene3D - 97 150 - -
Lan17g1149 236 ProSiteProfiles Myb-like domain profile. 91 143 IPR001005 -
Lan17g1149 236 SMART sant 95 145 IPR001005 -
Lan17g1149 236 ProSiteProfiles Zinc finger CCHC-type profile. 3 19 IPR001878 GO:0003676|GO:0008270
Lan17g1149 236 ProSiteProfiles SANT domain profile. 99 147 IPR017884 -
Lan17g1149 236 PANTHER TRANSCRIPTION FACTOR KUA1 3 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g1149 Lan-Chr17 19240450 19242966 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lan17g1149 Myb_DNA-binding 9.4e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g1149 - - lang:109331095 478.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g1149 17 19240450 19242966 Lan18g0395 18 7479141 7483564 LSH