Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g1142 ATGGTTGACACCAAGGGAAGGAAGGAAGAGGTTGTTACCCGAGAATACACCATCAACCTCCACAAACGCTTACATGGCTGCACATTCAAAAAGAAGGCTCCAAAAGCAATCAAGGAGATAAGGAAGTTTGCCCAGAAAGCCATGGGGACCACTGACGTTAGAGTGGATGTGAAGCTGAACAAGTATGTGTGGAGCCAGGGGATCCGAAGTGTCCCAAGGAGAATCCGAGTACGCATTGCACGCAAGAGAAATGACGATGAAGATGCAAAGGAAGAGCTCTATTCCCTTGTCACCGTGGTTGAAATCCCCAAGGAAGAGCTCAAAGGTTTGGGCACCAAGGTTATTGATGACGAGGAGTGA 360 0.4833 MVDTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKYVWSQGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVVEIPKEELKGLGTKVIDDEE* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g1142 119 SUPERFAMILY Ribosomal protein L31e 10 91 IPR023621 -
Lan17g1142 119 Gene3D - 8 119 IPR023621 -
Lan17g1142 119 PANTHER OS06G0319700 PROTEIN 6 119 - -
Lan17g1142 119 Pfam Ribosomal protein L31e 10 91 IPR000054 GO:0003735|GO:0005840|GO:0006412
Lan17g1142 119 PANTHER 60S RIBOSOMAL PROTEIN L31 6 119 IPR000054 GO:0003735|GO:0005840|GO:0006412
Lan17g1142 119 CDD Ribosomal_L31e 8 91 IPR000054 GO:0003735|GO:0005840|GO:0006412
Lan17g1142 119 ProSitePatterns Ribosomal protein L31e signature. 53 67 IPR020052 GO:0003735|GO:0005840|GO:0006412
Lan17g1142 119 SMART Ribosomal_L31e_2 9 92 IPR000054 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g1142 Lan-Chr17 19073141 19075310 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g1142 1 119 Cytoplasmic Ribosomal Protein Gene Family AT4G26230 79.832 1.09e-67 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g1142 K02910 - gmx:100305583 210.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g1142 17 19073141 19075310 Lan6g1995 6 30797939 30799546 LSH