Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g1133 ATGGAATTCTCTGTAAGAGCAGCGGAACTAACAACTCTATTAGAAAGTAGAATTACCAACTTTTACACTAATTTAAAAGTGGATGAGATCGGTCGAGTGGTCTCAGTTGGAGATGGGATTGCACGTGTTTATGGATTGAACGAGATTCAAGCTGGGGAAATGGTTGAATTTGCCAGCGGTGTGAAAGGAATAGCGTTGAATCTTGAGAATGAGAATGTCGGAATTGTTGTCTTTGGTAGTGATACCGCTATAAAAGAAGGAGATCTTGTCAAACGCACTGGATCTATTGTGGATGTTCCTGCGGGAAAGTCCCTGCTAGGGCGTGTGGTCGACGCGTTGGGAGTACCTATTGATGGAAGAGGGGCTCTAAGCGATCACGAGCGAAGACGTGTCGAAGTGAAAGCCCCTGGGATTATTGAACGTAAATCTGTGCACGAGCCTATGCAAACAGGGTTAAAAGCGGTAGATAGCCTGGTTCCTATAGGCCGTGGTCAACGAGAACTTATAATCGGGGACCGACAAACTGGAAAAACAGCTATTGCTATCGATACCATATTAAACCAAAAGCAAATGAACTCAAGGGCCACCTCTGAGAGTGAGACATTGTATTGTGTCTATGTTGCGATTGGACAGAAACGCTCAACTGTGGCACAATTAGTTCAAATTCTTTCAGAAGCGAATGCTTTAGAATATTCCATTCTTGTAGCAGCCACCGCTTCGGATCCTGCTCCTCTGCAATTTCTGGCCCCATATTCTGGGTGTGCCATGGGGGAATATTTCCGCGATAATGGAATGCACGCATTAATAATCTATGATGATCTTAGTAAACAGGCCGTGGCATATCGACAAATGTCATTATTGTTACGCCGACCACCAGGCCGTGAGGCTTTCCCAGGCGATGTTTTCTATTTACATTCCCGTCTCTTAGAAAGAGCCGCTAAACGATCGGACCAGACAGGTGCAGGTAGCTTGACCGCCTTACCCGTCATTGAAACACAAGCTGGAGACGTATCGGCCTATATTCCCACCAATGTGATCTCCATTACTGATGGACAAATCTGTTTGGAAACAGAGCTCTTTTATCGCGGAATTAGACCTGCTATTAACGTCGGCTTATCTGTCAGTCGCGTCGGGTCTGCCGCTCAGTTGAAAGCTATGAAACAAGTCTGCGGTAGTTTAAAACTGGAATTGGCACAATATCGCGAAGTGGCCGCCTTTGCTCAATTTGGCTCAGACCTTGATGCAGCGACTCAGGCATTACTCAATAGAGGTGCAAGGCTGAAAGACCTTCCTCTGAGTGGATATGTAGAAGTACGCTATGATGATCCAGAGAAACGTGTGGTTTCTGAACCCATACCTAAATTGGATAAAATCCGACCCATGTTACAACTTCGTAATTTACTGACCTTTATTACTTTAATATCTGCTAATTTTTTCGGACGTTTTTTAGGATCAGAAGGAACCGCTATAATGACAACCCCTTCCAGTCTAGTGCTTTATGGAATCCTCAATTTTAGCCTTCTCCTTCTATTTCGTATCTATTTGGATCATATTAATAATCGGTTTGGGTATAGAGTCGTATTTATTATTAATCTGTCCCTTCTTTCTTTAACCTCCCTATTTCTGTTTTCTATCCGTCTCTTTTTATCGGGTCTCATTCTCACGGCTTTGCTTTCCGCGGCAGTAGGGGAATTGAGCATGATGATGGCTCCTCCTGGAGGAGAGGGTGGAAGCGGGGCCGGTTCTTCTCAGCGCCCGGTCTTGGATCTTAATCTGCCGCCTGGCGGAAGGGACGACGAAACCAGCGTGAACCATCCTTCCCCAAACCCTTCACACCCAGAACCTGACGTTTACCATCCTTTACTGGATGACAAGACTCGTCGCGCCGAACTAGAAAATCGCGCCGTCTTTCATTTAGTGGGGTTGGATGAATATAATACTTCGGATATTATCGACTGTCAAGTGACCATAGAGCGGGCCATTGAGAAGGCCCTGCTCTCCGACGGCTTTTCCCGGGATGAGCTTGGTGATCCCAGGAAACGCGATGAGATAAGGGGATTTTTGTTCTACGCCAAGGGTGAACTTCTTTCTTATAGGAAGTCCCTTGAAATGCAGGAAGAATTGGAATATGGGACACACAGAAGTAAAGCCTATAGGGATATTATAGACGCCATCTCTTCTTCAAAGCTCTTTTTACGACGAGTAAAGGGAATAAAGAGGTGGGATAAGGGCGATATGTTATAA 2244 0.4532 MEFSVRAAELTTLLESRITNFYTNLKVDEIGRVVSVGDGIARVYGLNEIQAGEMVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKSLLGRVVDALGVPIDGRGALSDHERRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELAQYREVAAFAQFGSDLDAATQALLNRGARLKDLPLSGYVEVRYDDPEKRVVSEPIPKLDKIRPMLQLRNLLTFITLISANFFGRFLGSEGTAIMTTPSSLVLYGILNFSLLLLFRIYLDHINNRFGYRVVFIINLSLLSLTSLFLFSIRLFLSGLILTALLSAAVGELSMMMAPPGGEGGSGAGSSQRPVLDLNLPPGGRDDETSVNHPSPNPSHPEPDVYHPLLDDKTRRAELENRAVFHLVGLDEYNTSDIIDCQVTIERAIEKALLSDGFSRDELGDPRKRDEIRGFLFYAKGELLSYRKSLEMQEELEYGTHRSKAYRDIIDAISSSKLFLRRVKGIKRWDKGDML* 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g1133 747 ProSitePatterns ATP synthase alpha and beta subunits signature. 366 375 IPR020003 GO:0005524
Lan17g1133 747 TIGRFAM atpA: ATP synthase F1, alpha subunit 5 430 IPR005294 GO:0015986|GO:0045261|GO:0046933
Lan17g1133 747 Gene3D - 383 434 IPR038376 -
Lan17g1133 747 SUPERFAMILY C-terminal domain of alpha and beta subunits of F1 ATP synthase 384 429 - -
Lan17g1133 747 PANTHER ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL 6 432 - -
Lan17g1133 747 Gene3D - 4 95 IPR023366 -
Lan17g1133 747 SUPERFAMILY N-terminal domain of alpha and beta subunits of F1 ATP synthase 12 96 IPR036121 GO:0046034|GO:1902600
Lan17g1133 747 CDD F1_ATPase_alpha 96 378 IPR033732 GO:0032559
Lan17g1133 747 Pfam ATP synthase alpha/beta chain, C terminal domain 382 429 IPR000793 GO:0015986
Lan17g1133 747 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 98 381 IPR027417 -
Lan17g1133 747 CDD ATP-synt_F1_alpha_N 29 94 - -
Lan17g1133 747 Gene3D - 96 382 IPR027417 -
Lan17g1133 747 Hamap ATP synthase subunit alpha [atpA]. 3 523 IPR005294 GO:0015986|GO:0045261|GO:0046933
Lan17g1133 747 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 151 375 IPR000194 GO:0005524
Lan17g1133 747 PANTHER ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL 6 432 - -
Lan17g1133 747 MobiDBLite consensus disorder prediction 573 618 - -
Lan17g1133 747 CDD ATP-synt_F1_alpha_C 386 427 IPR000793 GO:0015986
Lan17g1133 747 Pfam ATP synthase alpha/beta family, beta-barrel domain 27 94 IPR004100 GO:0046034|GO:1902600
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g1133 62 381 Primary Pumps ATPases(2) AT4G38510 26.140 1.08e-24 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g1133 K02132 - gmx:15308608 814.298