Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g1111 ATGGTTTTTTCCAACAACCCCATCATAATCCATGAAAACTTGCTTGTTTCTCCTCAATCTTCAACACAATTATCTCTTCCTCTCACATTCTTAGACTTGTTCTGGTTAAGATTTCACCCAGTTGAACGAATCTTCTTCTATTCTCTTCCAAATCATTCACATGACCCATCTTTTTTCTTTAACAATATAGTTCCAAATCTCAAAACCTCACTTTCACTCACCCTTCAAAGTTTTCTTCCTCTTGCTGGTAACATTATTTGGCCTTCACATTTACCTAAACCTATCATACAATATAACCCTGGTGATGCTGTGTCATTTGTTGTAGCAGAATCTAACGTTGACTTCAACCATGTGTTACAAAACTCACCACGTGATGCTTCAGAATCACGTTTTTTGTTACCTAACTTGGATTCTTCAGATTCAACTGCTTCTGTTGTTTCCATGCAGGTTACTCTTTTTCCAAAAAAAGGGTTTTCTATTGGTATCAGTGCACACCATGCTGTTGTTGATGGAAAATCTTCAACTATGTTTATCAATGCTTGGGCTAATATGTGTAGAAGTAGTGTTGAAGAATGTCCTTCATTCTATTTGAAGCCGGAGTTAGAGCCTTTTTTTGATAGAGATGTTATCAAAGATCCAACTCAACTAGATCTTTTACTTGCAGATAATTGGACTAAAGACCCTAATGATGCTACAAAGAAGAAAAGAAGCTTGGAAATTCTATCATTTGTGTTTAAACCAAAAGTGGAGAATTCAGTTCGTGCAACATTCAAGATCACTTTTAAGGATTTGGACAAGTTAAAGAAAAGGTTGTTATCAAAATGGAATGAAGTGGTGAATGATGATGAAGTAGTAAACGATTCTTGTTCAAAGCCAGATACTTTATCATCATTTGTTGCTATTTGTGCTTATGTATCAACTTGCATGGCTAGAGCAATTCAAGAAGATGAAAAGAATGAGCAAAAAAAATTTGCTTTTGGATTTGCAGTTGATTGTAGGTCAAGGTTAGAGCCAAAAGTACCTGAGAACTATTTTGGTAATTGTGTGAATCTTCATGTAGTGGATGCAAAGCCAGAAGATTTTACAAAAGAAGATGGGTTTGTGATTGTTGCTAAGAAGATTCTAAGTAAAACAAAGAATTTGGATAAGGATGGTGTTCTTGAAGGAATGGATACATTGTCTTCAAAACATGAAACTAGGGTTAGGTTAGGAGTTGAGTTAATTGGAGTTGCAGGGTCAAGTAGGTTTAGAGTTTATGAGAATGATTTTGGTTGGGGAAAGCCTTCAAAGGTTGAGATTACTTCTGTGGATAGAGGTTTAAGCATTGGCATTTCAGAGAACAAAGATGAGAAAGGTGGACTTGAAGTAGGGTTGGTTTTGAAAAAGAATGTGATGGATATCTTCACTAATTTATTTCATGAAGGGCTATGA 1431 0.3557 MVFSNNPIIIHENLLVSPQSSTQLSLPLTFLDLFWLRFHPVERIFFYSLPNHSHDPSFFFNNIVPNLKTSLSLTLQSFLPLAGNIIWPSHLPKPIIQYNPGDAVSFVVAESNVDFNHVLQNSPRDASESRFLLPNLDSSDSTASVVSMQVTLFPKKGFSIGISAHHAVVDGKSSTMFINAWANMCRSSVEECPSFYLKPELEPFFDRDVIKDPTQLDLLLADNWTKDPNDATKKKRSLEILSFVFKPKVENSVRATFKITFKDLDKLKKRLLSKWNEVVNDDEVVNDSCSKPDTLSSFVAICAYVSTCMARAIQEDEKNEQKKFAFGFAVDCRSRLEPKVPENYFGNCVNLHVVDAKPEDFTKEDGFVIVAKKILSKTKNLDKDGVLEGMDTLSSKHETRVRLGVELIGVAGSSRFRVYENDFGWGKPSKVEITSVDRGLSIGISENKDEKGGLEVGLVLKKNVMDIFTNLFHEGL* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g1111 476 Gene3D - 249 476 IPR023213 -
Lan17g1111 476 Pfam Transferase family 11 470 - -
Lan17g1111 476 Gene3D - 8 236 IPR023213 -
Lan17g1111 476 PANTHER - 5 476 - -
Lan17g1111 476 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 5 476 - -
Lan17g1111 476 SUPERFAMILY CoA-dependent acyltransferases 296 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g1111 Lan-Chr17 18217688 18219227 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g1111 8 474 Monolignol Biosynthesis Gene Families AT5G48930 25.678 1.66e-23 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g1111 - - gmx:100813762 523.087