Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g1108 ATGGGTAAGGCTTCAAAGTGGTTTCGCGCTCTTCTTGGACTTAAGAAAACTGAATCATCCCAATCTTCTTCCTTCTCTCCCAAAAACAAACGCCGATGGAGTTTCCTTCAACCTTCTTCCACTCAAAACGACAATGATACACTCACCTCGCCGGAGCTTCCCCTTCATCATAACAACCACGCTGTAGCAGTGGCTGCCGCCACAGCTGCTGTAGCAGAGGCGGCTGTCGCCGCCGCTCAAGCCGCTGCCGCCGTGGTGAGGCTAACGAGCAGTAGCAGGTGCACTGGAAGCATTGGGATTCGCGAGGAATGGGCAGCTGTTAAGATTCAATCCGCTTTTCGCGGCTGTTTGGCAAGGAAAGCGCTGCGAGCATTAAAAGGGTTGGTGAAGCTGCAGGCACTTGTGAGAGGTCACATTGAGAGGAAGCAGCAAGCCAAGATGAGGGTCAAAAGAATGCAAGCACACTTACAAGCACAGGCACGTTTCTGTGCTGGCCGGGCTCAGATAATGCAGACACCATTTCATTCAACTTCAATATCATCTACCTGCCTCCTCCATGGTCCAGGAACACCAGACAAATTTGAAACCACAATCAGATCTAAGAGCATGAAATATGAGCAGTCACCGGTACTCAAGAGAAATGGCTCCAGATCCTGCGGGAGTAGATCAGAAAGCATTGTAGATGAACAATCCTGGTCCCAAGGAAGATCATTCATAAGAGCTAGCTGCAAGAGTGAAGAAAAAAGTGACAGGATTCTAGAAATCGATTACGGAAAACCACAACTCGCATCGAAACGAAGAAGCCTATTTTTCACAAGAGACTCAACTTCTCTCCAATCAGGTCACACCTCATCTTGTGAAGTTGAAGAGACTCCCTTTTGCACTGCAAGCAATAGTCCTCAATATCTATCTGCCACATCCAAAGATGATGGTTCAAAAAGAACTCATTTTACTCCTACAACAAGGAGTGATGGCTCAAGAAGCTACTTGTGTGGTTACTCTGACTATCCAAGTTACATGGCTTATACTGAGTCATCAAAAGCAAAAGTTAGATCACTGAGTGCACCAAAACAAAGGCCACAATATGATAGGTCAAGTTCATCGAATAGGTACTCACTTAATGGATTTGGTGATACAAGATTGGCCACACAGAAGGTATCTGCATTGCACACAGGCTTTACCAACAAAGCCTATCCTGGTTCTGGCCGTTTGGACAAGCTTGGCATGCCTGTGGGGTATAGATACTGA 1248 0.4671 MGKASKWFRALLGLKKTESSQSSSFSPKNKRRWSFLQPSSTQNDNDTLTSPELPLHHNNHAVAVAAATAAVAEAAVAAAQAAAAVVRLTSSSRCTGSIGIREEWAAVKIQSAFRGCLARKALRALKGLVKLQALVRGHIERKQQAKMRVKRMQAHLQAQARFCAGRAQIMQTPFHSTSISSTCLLHGPGTPDKFETTIRSKSMKYEQSPVLKRNGSRSCGSRSESIVDEQSWSQGRSFIRASCKSEEKSDRILEIDYGKPQLASKRRSLFFTRDSTSLQSGHTSSCEVEETPFCTASNSPQYLSATSKDDGSKRTHFTPTTRSDGSRSYLCGYSDYPSYMAYTESSKAKVRSLSAPKQRPQYDRSSSSNRYSLNGFGDTRLATQKVSALHTGFTNKAYPGSGRLDKLGMPVGYRY* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g1108 415 ProSiteProfiles IQ motif profile. 126 153 IPR000048 GO:0005515
Lan17g1108 415 MobiDBLite consensus disorder prediction 19 54 - -
Lan17g1108 415 SMART iq_5 101 123 IPR000048 GO:0005515
Lan17g1108 415 SMART iq_5 124 145 IPR000048 GO:0005515
Lan17g1108 415 PANTHER IQ-DOMAIN 5-RELATED 1 410 - -
Lan17g1108 415 Gene3D - 100 155 - -
Lan17g1108 415 ProSiteProfiles IQ motif profile. 102 130 IPR000048 GO:0005515
Lan17g1108 415 MobiDBLite consensus disorder prediction 351 370 - -
Lan17g1108 415 Pfam Protein of unknown function (DUF4005) 300 373 IPR025064 -
Lan17g1108 415 MobiDBLite consensus disorder prediction 300 326 - -
Lan17g1108 415 Pfam IQ calmodulin-binding motif 104 123 IPR000048 GO:0005515
Lan17g1108 415 PANTHER CALMODULIN BINDING PROTEIN IQD22 1 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g1108 Lan-Chr17 18115791 18123841 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g1108 1 415 IQD Protein Family AT4G23060 41.468 1.74e-70 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g1108 - - lang:109330707 769.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g1108 17 18115791 18123841 Lan17g0145 17 885267 888371 PCT