Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g1102 ATGGCTAAGGTATTGGAGTCTTTGGATGTGTCTAAATCAAAGGAGAATAAGAAGAAGAAAAAGAAAAATGAGGTTTTGGAAGAAGAAGAAGAAGAAGAAGAAAAGAGTGTAAGGTGTTGGCTTAGGTTCAGGTTCTTTGGTAGCTGCATTTCTTCAAAATCCAAAGTTGATAGCTCAGTTAGTGGTACCAGTACTAATTATGCTGAAAGTAAATCAACTATTGATACAAGTAGAGACCAACCGGCAGTTGCTGTAGTCTCTTCTACAACCACCAGTAATACCGAAAGCAATGCATCCACTTTGAAACTTGAAGATGAGCTTAAAGTTGCTTCAAGGCTTCGAAAATTCTCTTTCAATGATCTTAAGCTAGCAACAAGAAATTTTCGGCCTGAGAGTCTTCTTGGTGAAGGCGGGTTTGGTTGCGTGTTCAAGGGATGGATCGAAGAAAATGGAACTGGACCGGTGAAACCTGGCACAGGGCTTACTGTTGCTGTGAAAACCCTCAATCACGATGGGCTTCAGGGTCATAAAGAATGGCTGGCCGAAGTAAATTTTCTTGGTGATCTAGTTCATCCAAACCTTGTTAAACTTATAGGTTACTGCATTGAGGATGATCAAAGGTTGCTAGTGTATGACTTCATGCCTCGTGGAAGTCTGGAAAATCACTTGTTTAGGAGATCCCTGCCTCTTCCATGGTCCATTAGGATGAAAATTGCACTAAGTGCTGCACAGGGTCTTGCTTTTCTTCACGAGGAAGCTGAACGACCCGTAATATATAGGGATTTCAAAACATCCAATATACTGTTGGATGCAGACTACAATGCCAAGCTCTCAGACTTTGGACTCGCAAAAGATGGTCCAGAAGGTGATAAAACCCATGTGTCTACTCGAGTGATGGGAACCTATGGTTATGCAGCACCAGAATATGTCATGACGGGACATCTTACATCAAGGAGTGACGTGTACAGTTTCGGAGTTGTACTGCTTGAGATGTTGACTGGTAGAAGATCAATGGACAAAAACCGGCCCAACGGTGAACATAACCTTGTGGAATGGGCTAGACCACATCTAGGAGAGAGAAGAAGGTTCTACCGGTTGATTGACCCTCGCTTGGAAGGTCATTTTTCGATTAAAGGAGCTCAGAAAGCTGCTCATCTCGCTGCCCACTGCCTTAGTAGAGATCCGAAAGCCAGACCATTAATGAGTGAAGTCGTAGAAGCTTTGAAGCCTCTACCAAACCTTAAGGACATGGCTAGCTCATCATATTATTTCCAGACAATGCAAGCCGACCGATGTGGCGCAAGCCCGAATACTAGAAACGGGCAAACACAAGGCGGTGCATTGCTCACCCGGAATGGCCAGCAGCAGAGGAGCCTTTCATTATCAAATGGTACTCATGCATCTCCATATCATCACCAGTATCCTCAACAATCACCAAAACCCAATGCGAAGGCATAG 1458 0.439 MAKVLESLDVSKSKENKKKKKKNEVLEEEEEEEEKSVRCWLRFRFFGSCISSKSKVDSSVSGTSTNYAESKSTIDTSRDQPAVAVVSSTTTSNTESNASTLKLEDELKVASRLRKFSFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTGPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHPNLVKLIGYCIEDDQRLLVYDFMPRGSLENHLFRRSLPLPWSIRMKIALSAAQGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAHLAAHCLSRDPKARPLMSEVVEALKPLPNLKDMASSSYYFQTMQADRCGASPNTRNGQTQGGALLTRNGQQQRSLSLSNGTHASPYHHQYPQQSPKPNAKA* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g1102 485 PANTHER OS01G0588500 PROTEIN-RELATED 60 475 - -
Lan17g1102 485 ProSiteProfiles Protein kinase domain profile. 128 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g1102 485 ProSitePatterns Serine/Threonine protein kinases active-site signature. 257 269 IPR008271 GO:0004672|GO:0006468
Lan17g1102 485 Coils Coil 11 36 - -
Lan17g1102 485 MobiDBLite consensus disorder prediction 8 26 - -
Lan17g1102 485 CDD STKc_IRAK 134 411 - -
Lan17g1102 485 MobiDBLite consensus disorder prediction 433 485 - -
Lan17g1102 485 ProSitePatterns Protein kinases ATP-binding region signature. 134 166 IPR017441 GO:0005524
Lan17g1102 485 PANTHER KINASE APK1B, CHLOROPLAST, PUTATIVE-RELATED 60 475 - -
Lan17g1102 485 Pfam Protein tyrosine and serine/threonine kinase 132 408 IPR001245 GO:0004672|GO:0006468
Lan17g1102 485 Gene3D Transferase(Phosphotransferase) domain 1 214 429 - -
Lan17g1102 485 MobiDBLite consensus disorder prediction 53 98 - -
Lan17g1102 485 Gene3D Phosphorylase Kinase; domain 1 107 213 - -
Lan17g1102 485 MobiDBLite consensus disorder prediction 1 34 - -
Lan17g1102 485 SUPERFAMILY Protein kinase-like (PK-like) 109 408 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g1102 Lan-Chr17 17989281 17994911 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g1102 114 408 Glycoside Hydrolase AT3G07070 58.054 2.92e-116 346
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lan17g1102 PK_Tyr_Ser-Thr 2.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g1102 - - gmx:100787127 829.32