Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g1095 ATGAATGATGAAGTGATATCATTTTCCGATTACGACCTCCTTTGCACGGAGGACACCTCCGTAGTCTTGTCCGTTGAGTCGCCGGAATATTCCTCCGACATGAATTCATGGGAGGAGGAAAGTGTGGCCAGTTTTATTGAAGAGGAGAACAAGTTCGTCCCACCAGTAGAGTACCTATCCAGAATCCAATCTACTTCTCTTCAATCTGTTGCTTGGATTCTTAAGGTACATGCCTACTATGGTTTTCACCCACTCACCGCCTATCTTTCTCTCAATTATTTCCATCGCTTTTTGGATTCTCACCAATTACAGCTAACAAAGGATTGGGCCCTTCAACTTCTATCTGTTGCATGTTTATCTCTTGCCGCAAAGATAGAGGAACCTCTTGTTCCGTCTCTCTTGGATCTTCAGGTGGAAGGTGCCAAATACATATTTCAGCCTAGAACAATTTGTAAGATGGAGCTACTTGTTTTGGATGTGTTGGATTGGAGGCTAAAATCAATTACCCCATTTAACTTCCTTAGTTACTTTGCATCCAAATTGGATTCAACTTCAACTTTTAATGGGTTCCTTATTTCAAGGGCTACAGACATAATCTTGTCTAATATCCAAGAGGCTAGCTTTCATGCTTACAGACCATCATGCATTGCTGCTGCTGCTATACTCTATGCAGCTAATGAAATTCCTAATTGGTCTCTCATTAATCCTGAACATGCTGAGTCATGGTGTCAGGGATTAACAAAAGAAAAAATCAAAGGGTGCTACAAGGTAATGCAAGAACTTATGAATGGCAACAACCGGAGTAAGCTCCCGAAAATGTTACCGGAGCTGCGTGTAACAACCCGAACCCGAATGAGATCAAGTGTATCATCATTACCATCTTCATTATCCTCCCTCTCATTGTCTTATAAAAGGAGAAAAATTGATAATTGTTTGTGGGTAGATGATGAAAAAGGAAACTCCTAG 966 0.4099 MNDEVISFSDYDLLCTEDTSVVLSVESPEYSSDMNSWEEESVASFIEEENKFVPPVEYLSRIQSTSLQSVAWILKVHAYYGFHPLTAYLSLNYFHRFLDSHQLQLTKDWALQLLSVACLSLAAKIEEPLVPSLLDLQVEGAKYIFQPRTICKMELLVLDVLDWRLKSITPFNFLSYFASKLDSTSTFNGFLISRATDIILSNIQEASFHAYRPSCIAAAAILYAANEIPNWSLINPEHAESWCQGLTKEKIKGCYKVMQELMNGNNRSKLPKMLPELRVTTRTRMRSSVSSLPSSLSSLSLSYKRRKIDNCLWVDDEKGNS* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g1095 321 CDD CYCLIN 72 158 IPR013763 -
Lan17g1095 321 Pfam Cyclin, N-terminal domain 42 165 IPR006671 -
Lan17g1095 321 Gene3D - 44 255 - -
Lan17g1095 321 PANTHER CYCLINS 27 309 IPR039361 -
Lan17g1095 321 SUPERFAMILY Cyclin-like 150 263 IPR036915 -
Lan17g1095 321 SMART cyclin_7 71 159 IPR013763 -
Lan17g1095 321 SUPERFAMILY Cyclin-like 37 165 IPR036915 -
Lan17g1095 321 SMART Cyclin_C_2 168 295 IPR004367 -
Lan17g1095 321 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 27 309 - -
Lan17g1095 321 Pfam Cyclin, C-terminal domain 168 277 IPR004367 -
Lan17g1095 321 Gene3D - 55 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g1095 Lan-Chr17 17878665 17882720 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g1095 6 321 Core Cell Cycle Gene Families AT1G70210 54.878 3.41e-110 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g1095 K18810 - gmx:100778578 414.075
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0613 17 5168071 5172920 Lan17g1095 17 17878665 17882720 PCT
Lan18g0669 18 11858006 11862191 Lan17g1095 17 17878665 17882720 PCT
Lan6g0614 6 5378233 5381867 Lan17g1095 17 17878665 17882720 PCT
Lan17g1095 17 17878665 17882720 Lan17g0613 17 5168071 5172920 PCT
Lan17g1095 17 17878665 17882720 Lan18g0669 18 11858006 11862191 PCT
Lan17g1095 17 17878665 17882720 Lan6g0614 6 5378233 5381867 PCT