Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g1094 ATGGCGGCGAAGCTACGGTGGGGAGAATTGGAGGAAGACGACGGTGAAGATTTAGATTTTCTTTTGCCGCCGAAGCAAGTGATTGGTCCAGATGATAATGGCATAAAGAAAATTATCGAGTACAAATTCGATGATGAAGGGAACAAGGTTAAGGTCACTACTATCACTCGCACCCGCAAACTCGCCAACGCGCGTCTCAGTAAACGCGCCATCCAACGCCGATCATGGCCGAAGTTCGGTGACGCCGTTCATGAGGATGTCGGTAGCCGCCTCACCATGGTCTCCACCGAAGAGATCCTCCTTGAACGTCCCAAGCCTCTAGGTGCAAAAACAGAGGAGCCACAGGCTGCTGGAGACCCATTTCAGAGAGGTGCTGTTCTTATGGTCTGTAGGACTTGTGGGAAGAAGGGTGACCATTGGACTTCAAGGTGTCCGTACAAGGATCTTGCCCAACCATCTGAAGGATTCGTCGATAAGCCTCCAGCATCTGATGCTGCAACTGGTGCGGCCGGTGCAACCAAGGGATCATATGTGCCTCCTAGCATGAGAGCAGGTGCAGAAAGGACTACTGGGTCAGACATGCGCCGAAGGAATGACGAGAACTCTGTAAGGGTCACCAATCTCTCAGAGGACACAAGAGAACCCGACTTGCTTGAGCTGTTCCGTCCTTTTGGTGCTGTGAGCAGAGTCTATGTTGCTATTGACCAGAAGACCGGCATGAGCAGGGGATTTGGCTTTGTTAACTTTGTAAGCAGGGAAGATGCACAAAGAGCTATCAACAAACTCAATGGATACGGCTACGACAATCTCATCCTTAGAGTTGAATGGGCCACCCCAAGGACAAACTAA 849 0.5077 MAAKLRWGELEEDDGEDLDFLLPPKQVIGPDDNGIKKIIEYKFDDEGNKVKVTTITRTRKLANARLSKRAIQRRSWPKFGDAVHEDVGSRLTMVSTEEILLERPKPLGAKTEEPQAAGDPFQRGAVLMVCRTCGKKGDHWTSRCPYKDLAQPSEGFVDKPPASDAATGAAGATKGSYVPPSMRAGAERTTGSDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAIDQKTGMSRGFGFVNFVSREDAQRAINKLNGYGYDNLILRVEWATPRTN* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g1094 282 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 4 282 - -
Lan17g1094 282 SMART rrm1_1 202 275 IPR000504 GO:0003723
Lan17g1094 282 Hamap Eukaryotic translation initiation factor 3 subunit G [EIF3G]. 4 281 IPR017334 GO:0003743|GO:0005737|GO:0005852
Lan17g1094 282 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 201 279 IPR000504 GO:0003723
Lan17g1094 282 CDD RRM_eIF3G_like 202 277 IPR034240 -
Lan17g1094 282 CDD eIF3G 33 148 IPR024675 -
Lan17g1094 282 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 4 282 - -
Lan17g1094 282 Gene3D - 161 282 IPR012677 -
Lan17g1094 282 SUPERFAMILY RNA-binding domain, RBD 189 281 IPR035979 GO:0003676
Lan17g1094 282 Pfam Eukaryotic translation initiation factor 3 subunit G 26 149 IPR024675 -
Lan17g1094 282 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 203 269 IPR000504 GO:0003723
Lan17g1094 282 PIRSF Transl_init_eIF-3_RNA-bind 1 282 IPR017334 GO:0003743|GO:0005737|GO:0005852
Lan17g1094 282 MobiDBLite consensus disorder prediction 155 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g1094 Lan-Chr17 17864610 17866624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g1094 3 280 Eukaryotic Initiation Factors Gene Family AT3G11400 68.590 3.56e-152 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g1094 K03248 - gmx:100776807 501.516