Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g1092 ATGAAAGTGGATGAAGTAGTTGGTAGTAGCAGTGAGTGGAGCATAGAGGAAGATAAAGCATTTGAAAATGCTTTGGCGACTTATCCCGAAGATGCTTCGGATCGATGGGAAAAGATTGCAGGAGATGTACCAGGAAAGAGTTTACAAGAGATTCAACTTCACTACAATCTCTTGGTTGATGATGTTAATCAAATTGAATCTGGTTTTGTGCCTCTGCCATCTTATAATTCTTCTTCTCCTAGAGGCTCAATAGGCCAAGTGAGTGATGAAGGAGCTGAAAACAAGGGAAACAGACTCTGGAATTATAACAATGAATCTAATCTTAAGGCTTCGAAATCGGATCAAGAACGACGAAAGGGTATTGCCTGGACTGAGGAAGAACACAGGTTATTTCTTCTTGGTTTGGAGAAGTATGGAAAAGGCGATTGGCGAAGTATATCAAGGAACTTTGTGGTAACAAGAACACCTACACAAGTAGCAAGCCATGCCCAAAAATACTTCATTCGTCTGAACTCGATGAATAAAGATAGAAGACGATCAAGCATACACGATATCACCAGTGTGAACAACGGAGATGCTTCATCAGCTCAAGGACCAATTACAGGTCAAGCAAATGGCTCAACCGGAAACTGTACTGGAAAATTACCCAAACAAGGCCCTCCAAACCCAAGTGGTGCCACAAGTGTAGGACTATATGCTCCTCCAACTGTAGGACAACCTATAGGAGGAGGAGCCCTTGTGCCTGCATTTGGCACCCCTGTGAATCTTCCTCCCCCTCACATGGCTTACGGCGTCCAAGCCCCGATTCATGGTGCTGTTGTTCCTGGTGCACCAATGAACTTGGGTCATATGCCATACCACATGCCACAGCCACACACATCTCATAGATGA 891 0.4433 MKVDEVVGSSSEWSIEEDKAFENALATYPEDASDRWEKIAGDVPGKSLQEIQLHYNLLVDDVNQIESGFVPLPSYNSSSPRGSIGQVSDEGAENKGNRLWNYNNESNLKASKSDQERRKGIAWTEEEHRLFLLGLEKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSVNNGDASSAQGPITGQANGSTGNCTGKLPKQGPPNPSGATSVGLYAPPTVGQPIGGGALVPAFGTPVNLPPPHMAYGVQAPIHGAVVPGAPMNLGHMPYHMPQPHTSHR* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g1092 296 ProSiteProfiles Myb-like domain profile. 115 167 IPR001005 -
Lan17g1092 296 MobiDBLite consensus disorder prediction 185 228 - -
Lan17g1092 296 Gene3D - 121 173 - -
Lan17g1092 296 PANTHER TRANSCRIPTION FACTOR KUA1 8 283 - -
Lan17g1092 296 ProSiteProfiles SANT domain profile. 123 171 IPR017884 -
Lan17g1092 296 SMART sant 9 61 IPR001005 -
Lan17g1092 296 SMART sant 119 169 IPR001005 -
Lan17g1092 296 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 114 171 IPR017930 -
Lan17g1092 296 MobiDBLite consensus disorder prediction 185 225 - -
Lan17g1092 296 ProSiteProfiles Myb-like domain profile. 11 59 IPR001005 -
Lan17g1092 296 SUPERFAMILY Homeodomain-like 117 172 IPR009057 -
Lan17g1092 296 CDD SANT 122 167 IPR001005 -
Lan17g1092 296 MobiDBLite consensus disorder prediction 77 100 - -
Lan17g1092 296 Pfam Myb-like DNA-binding domain 11 56 IPR001005 -
Lan17g1092 296 Pfam Myb-like DNA-binding domain 122 167 IPR001005 -
Lan17g1092 296 Gene3D - 7 72 - -
Lan17g1092 296 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 119 169 IPR006447 GO:0003677
Lan17g1092 296 CDD SANT 12 59 IPR001005 -
Lan17g1092 296 PANTHER HOMEODOMAIN-LIKE TRANSCRIPTIONAL REGULATOR-RELATED 8 283 - -
Lan17g1092 296 SUPERFAMILY Homeodomain-like 11 67 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g1092 Lan-Chr17 17844291 17849384 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lan17g1092 Myb_DNA-binding 8.8e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g1092 - - gmx:100819797 443.736