Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g1083 ATGGCTCACAAGAAGGAGAAAAGTGATTCCAAAAATGATCCGAAAAGTGATTCCAAAAACGATACCAAAAGTGATTCTTCTGATATAGACAAGATTTTACCATCCAAAGAGATTTCAAAGAATCACTTATTTAACATTAACAATGATTCATTCCCAACACCAAAACCTATTAAAGATTCACTTTCTCCAAAAACTGCACCGTCTGAACCATTGCCTTCTCCACCGTCGCCGCCACCATCACCGTTGTTGGTCAAGTCTCCACCATCACCGTTGTTGGTCAAGTCTCCACCATCACCGTTGTTGCTCAAGTCTCCATCACCACCACCACCCTCATTACCACCATCCTCTCCACCACCTCTACCCTCCTCTTCACCACCACCACCACCATTACCCTCTTCACCACCGCCATTACCTCCCTCTCCATCACCACCACCACCCTCTTTGCCACCACCACCACAACTATCACCACCACCGCCACCGTCCCAGACTAATCAAATTAAACCACCACCACCTTCATCATCATCATCTTTATCATCTCCTCCTCCTTCACCACCCTCACGTAATAGTGCACCTTCCAATGATTCTTCAACGTCCAAATCACCCTTCTCTACAATTCCAACACCTTCAGGTTCAAACAACCATACCATGCATGGTGGTGGTGGGTCCCATGCAAAATCAGTGGGTGGTTCTTCTTCTTCTTCTTCTTCTTCAAATGATTCTTCTTCCAATGATTCTTCTTCGAATGATTCTTCATCATCATCATCACATAGTGATGATAATAATCCAGGAAAATATGTTGGTTATACATTGGTAGGGGTTTTCATTGTTGGTTTAGTTGTTTTAGCACTATTTTACACTTATAAGAGATCAAGGAGAAAAACAACAAAAGGGGATTCCTTGGTTGCAACATATATACCAGCCCATGATATTAACATTCATGCAAAATCAGGTACAGATTTGCAATACAAAGCACAACAGCAACAATCTGTGCATGGAAACAACTATGGAAATGGGAGCATGAAACATATAGGAGGAGGTTCTTTAGAAACAGCACAGCCCAAAAGTGCTCAAATAGCTTTCACCTATGAAATGGTTATGGAAATGACCAATGCATTTTCTAGTGAAAATGTTATAGGAGAAGGTGGATTTGGGTGTGTTTACAAGGGTTGGTTACATGATGGAAGAACAGTTGCAGTTAAACAGCTTAAAGCTGGAAGTGGACAAGGTGAGAGGGAATTTCAAGCTGAAGTTGAGATTATAAGCAGAGTTCATCATAAGCATTTGGTGTCATTGGTTGGTTATTGCATATCTGAGCAACAAAGAATGCTTATCTATGAGTTTCTACCTAATGGAACACTCCATCATCACTTGCATGGAAATGGAATGCCAGTTCTTGATTGGTCCAAGAGGCTCAAGATTGCAATTGGAGCTGCAAAGGGCTTGGCATATTTGCATGAGGACTGCAGCCAAAAGATTATTCACAGAGATATTAAGTCAGCAAATATACTTTTGGATGATGCTTTTGAGGCACAGGTTGCAGACTTTGGACTTGCAAGGCTAACAGATACTGGTAATACCCATGTATCAACTAGGGTTATGGGTACCTTTGGATACATGGCTCCAGAATATGCAACAAGTGGAAAATTAACTGATAGATCAGATGTTTTTTCGTTCGGGGTTGTCCTCCTTGAGCTTGTAACTGGAAGGAAACCAGTTGATCAAACTCAGCCTTTGGGAGATGAGAGTTTGGTTGAGTGGGCTCGACCGCTTCTCATTCGTGCCATCGAGACACACGACATTAGTGAATTAACAGACCCAAGGCTTGAAAAGCACTATGTGGAGAGTGAAATGTTCAGAATGATTGAAGCAGCTGCAGCATGTGTTCGCCACTCAACTCCTAAACGGCCACGAATGGTTCAGGTGGTAAGGGCCTTAGATAGTGCAGATGATATATCTGATCTAACTAATGGGGTAAAATATGGTCATAGCACTGTTTATGATTCTGGGCAGTATGATAAAGATATTATGCTATTCAGGAGGATGGCCAATGACAGTTTTGTTGATGCTAATTCTGATACATATAGTAAAGAATACGGATATTCGAGAGATATGTCAGGAATCCAACCTGCATGGTTACGGAGTGGTTCTAGCGGCGAGTCAGAATCGAAAGCTTTCAACCGTCATCAGAGCAGCAGTTGA 2199 0.4211 MAHKKEKSDSKNDPKSDSKNDTKSDSSDIDKILPSKEISKNHLFNINNDSFPTPKPIKDSLSPKTAPSEPLPSPPSPPPSPLLVKSPPSPLLVKSPPSPLLLKSPSPPPPSLPPSSPPPLPSSSPPPPPLPSSPPPLPPSPSPPPPSLPPPPQLSPPPPPSQTNQIKPPPPSSSSSLSSPPPSPPSRNSAPSNDSSTSKSPFSTIPTPSGSNNHTMHGGGGSHAKSVGGSSSSSSSSNDSSSNDSSSNDSSSSSSHSDDNNPGKYVGYTLVGVFIVGLVVLALFYTYKRSRRKTTKGDSLVATYIPAHDINIHAKSGTDLQYKAQQQQSVHGNNYGNGSMKHIGGGSLETAQPKSAQIAFTYEMVMEMTNAFSSENVIGEGGFGCVYKGWLHDGRTVAVKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYCISEQQRMLIYEFLPNGTLHHHLHGNGMPVLDWSKRLKIAIGAAKGLAYLHEDCSQKIIHRDIKSANILLDDAFEAQVADFGLARLTDTGNTHVSTRVMGTFGYMAPEYATSGKLTDRSDVFSFGVVLLELVTGRKPVDQTQPLGDESLVEWARPLLIRAIETHDISELTDPRLEKHYVESEMFRMIEAAAACVRHSTPKRPRMVQVVRALDSADDISDLTNGVKYGHSTVYDSGQYDKDIMLFRRMANDSFVDANSDTYSKEYGYSRDMSGIQPAWLRSGSSGESESKAFNRHQSSS* 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g1083 732 Gene3D Transferase(Phosphotransferase) domain 1 448 662 - -
Lan17g1083 732 MobiDBLite consensus disorder prediction 1 37 - -
Lan17g1083 732 MobiDBLite consensus disorder prediction 189 261 - -
Lan17g1083 732 ProSitePatterns Serine/Threonine protein kinases active-site signature. 492 504 IPR008271 GO:0004672|GO:0006468
Lan17g1083 732 CDD STKc_IRAK 378 646 - -
Lan17g1083 732 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK13-RELATED 87 713 - -
Lan17g1083 732 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 87 713 - -
Lan17g1083 732 MobiDBLite consensus disorder prediction 711 732 - -
Lan17g1083 732 MobiDBLite consensus disorder prediction 1 261 - -
Lan17g1083 732 ProSiteProfiles Protein kinase domain profile. 372 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g1083 732 PRINTS Proline rich extensin signature 52 73 - -
Lan17g1083 732 PRINTS Proline rich extensin signature 75 91 - -
Lan17g1083 732 PRINTS Proline rich extensin signature 95 112 - -
Lan17g1083 732 PRINTS Proline rich extensin signature 114 139 - -
Lan17g1083 732 SMART serkin_6 372 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g1083 732 MobiDBLite consensus disorder prediction 67 188 - -
Lan17g1083 732 Gene3D Phosphorylase Kinase; domain 1 341 447 - -
Lan17g1083 732 ProSitePatterns Protein kinases ATP-binding region signature. 378 400 IPR017441 GO:0005524
Lan17g1083 732 MobiDBLite consensus disorder prediction 40 55 - -
Lan17g1083 732 SUPERFAMILY Protein kinase-like (PK-like) 354 645 IPR011009 -
Lan17g1083 732 Pfam Protein tyrosine and serine/threonine kinase 375 644 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g1083 Lan-Chr17 17682901 17693918 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g1083 260 698 Trihelix Transcription Factor Family AT1G70460 62.500 0.0 573
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Lan17g1083 PK_Tyr_Ser-Thr 2.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g1083 - - lang:109330554 984.941