Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g1065 ATGCACATGGAAGTTCCAATGGAGGAAAAACCATTCCCTGCATGGTCATGGTCTGTTGAGCAATGCTTGAAAGAGTATGCAGTGGAAGTAGACAAGGGTCTGAGTACTTACGAGGTTGAGAAGCTTCGTTGCGAGAAATATGGTTGGAATGAGCTAGCAAAAGAGAAGGGGAAGCCATTGTGGCAACTAGTATTAGAACAATTTGATGATATGTTGGTGAAGATACTTTTGCTTGCAGCCTTCATATCATTTGTTTTAGCTTACTTTGATGGAAGTGAATCTGGATTTGAAGCTTATGTGGAGCCACTTGTGATCCTTTTAATTTTGGTCCTTAATGCAATTGTTGGAGTTTGGCAAGAGAATAATGCTGAAAAGGCTCTTGAAGCTCTTAAAGAGTTGCAATGTGAATCGGCAAAAGTGTTAAGGGATGGCAATTTAGTGCCTGATCTGCCTGCAAGAGAGCTTGTTCCTGGTGATGTTGTGGAACTGCATGTTGGAGATAAAGTCCCTGCTGATATGAGAGTTGCAGCTTTGAAAACCTCGACGTTACGAGTTGAGCAAAGTTCCTTAACCGGAGAAGCTATGCCTGTTCTCAAAGGCACCAATCCTATATTCTTGGATGACTGTGAATTGCAAGCCAAAGAGAATATGGTTTTCTCAGGCACCACAGTTGTCAATGGGAGCTGTGTTTGTATTGTTATTACCACTGGAATGAACACGGAAATCGGAAAGATACAGAAGCAAATACATGAGGCTTCTCTGGAGGACAATGACACTCCTTTGAAGAAGAAATTGGATGAATTTGGTGGCAGGCTTACCACTGCAATTGGGGTAGTTTGCCTTATTGTGTGGGTTATAAACTACAAAAATTTCCTTTCATGGGATATTGTAGATGGATGGCCTTCAAACATCCAATTTTCGTTCGGAAAATGCACCTATTATTTCAAAATTGCGGTTGCACTTGCTGTGGCTGCAATACCTGAAGGTCTTCCTGCTGTTATCACAACTTGTTTAGCCCTTGGTACAAGGAAAATGGCTCAAAAGAATGCAATTGTGAGAAAGCTTCCAAGTGTAGAGACTTTGGGATGTACAACTGTGATTTGTTCAGATAAAACTGGCACTCTAACAACAAATCAAATGTCTGTGACTGAGTTCTTTACATTGGGTGGGAAAACCAATTCTTCTCGAGTCATTAGCGTTGAAGGCACGACTTATAATCCAAATGATGGGGGCATTGTTGATTGGACTTGCTATAACATGGATGTAAACTTGGTGGCCATGGCTGAAATATGTGCTGTTTGTAATGATGCTGGGATTTATTTTGATGGTCGCCTTTTTCGAGCTACAGGTTTGCCTACTGAAGCCGCACTCAAAGTTTTGGTTGAAAAGATGGGAGTTCCAGATATGAAGTCAAGGAACAAAATTCGTGATACACAACTTGCTGCTAAAATGATCGGTTGCAACACTCTGAAGTTAGGCTGTTGTGAGTGGTGGAATAAAAGATCCAAGAAGATAGCTACATTGGAGTTTGATCGCATTCGGAAGTCAATGAGTGTTATTGTTCGTGAACCAGATGGGCAGAATCGGCTTCTTGTCAAGGGAGCTGTTGAGAGTTTACTAGAGCGTAGTTCGTACGTGCAACTTGCTGATGGATCCCTAGTTCCAACAGATGAGCAATGCAGGGAACTACTTCTTCAAAGACTCCTGGAGATGAGTTCAAAGGGATTGCGTTGCTTGGGTATGGCATATAAGGATGATTTGGGAGAATTTTCAGATTATTATGCAGATACTCATCCTGCACATAAGAAGTTGCTTGATCCAGCATGCTACTCTTTAATCGAAAGTGGTCTAGTTTTTGTTGGTGTTGTTGGCATAAGAGACCCTCCACGTCAGGAAGTTCATGAAGCAATTGAGGATTGCAAGAAAGCTGGTATTAGAGTTATGGTAATCACCGGAGACAATAGGTCAACAGCAGAGGCTATTTGTCGCGAGATCAAATTGTTCTCTAAAGATGAGGATCTCACATTGAAAAGTCTGACAGGTAAGGAATTCACATCTCTTTCTCATTCAGAAAAAGTTCAAATATTGTCAAGACCTGGAGGCAAGGTTTTCTCTCGAGCTGAGCCGAGACACAAGCAAGACATAGTGAGGCTACTGAAAGAACTCGGCGAGATTGTTGCAATGACTGGAGATGGTGTGAATGATGCACCGGCGCTTAAGCTTGCTGACATAGGGATTGCTATGGGCATAACTGGAACAGAGGTTGCAAAAGAAGCTTCAGATATGGTACTTGCAGATGACAATTTTAGTACCATTGTTTCAGCTATTGCCGAGGGTCGCTCTATTTACAATAACATGAAAGCTTTTATCAGGTACATGATATCATCAAATGTTGGAGAAGTAATATCAATATTCTTGACTGCTGCTTTGGGGATCCCAGAATGCATGATACCAGTACAACTTCTTTGGGTGAATTTGGTTACTGATGGTCCACCTGCAACAGCTCTTGGTTTTAACCCTGCTGATGTTGATATCATGCAAAAACCACCTCGCAAAAGCGATGATGCTCTCATAAGTTCTTGGGTTCTTCTCCGTTATCTAATCATTGGTTCCTATGTGGGAATTGCAACAGTTGGAATTTTTGTTCTGTGGTACACCCAGGCATCTTTTCTAGGCATCAATCTTGTGAGTGATGGGCACACAATTATAGAACTTTCGCAGCTTCGCAACTGGGGGGAATGTCATTCATGGTCTAATTTTACTGCTGTGCCATACACGGTTGGTAACGGTCGTGTGATCACATTTTCAAATCCTTGTGACTATTTTTCAGTTGGCAAAGTTAAGGCCATGACTCTGTCTCTCTCTGTATTGGTAGCAATTGAAATGTTTAATTCTTTGAATGCACTCTCAGAAGATAATAGCTTGAGAACCTTACCACCTTGGAGGAACCCCTGGCTTTTGTTAGCAATGTCAATGTCACTGGGACTACACTGTGTTATACTCTACATTCCACTCCTCAACGATGTGTTTGGTGTTGTTCCACTTAGTTTGAATGAGTGGTTTATAGTTATACTTATATCATCACCTGTCATTCTAATTGATGAAATTCTAAAATTTGTGGTAAGGAGTCAAAGGAAGATGAGAAAGGAGAAAGCAGCATGA 3162 0.4146 MHMEVPMEEKPFPAWSWSVEQCLKEYAVEVDKGLSTYEVEKLRCEKYGWNELAKEKGKPLWQLVLEQFDDMLVKILLLAAFISFVLAYFDGSESGFEAYVEPLVILLILVLNAIVGVWQENNAEKALEALKELQCESAKVLRDGNLVPDLPARELVPGDVVELHVGDKVPADMRVAALKTSTLRVEQSSLTGEAMPVLKGTNPIFLDDCELQAKENMVFSGTTVVNGSCVCIVITTGMNTEIGKIQKQIHEASLEDNDTPLKKKLDEFGGRLTTAIGVVCLIVWVINYKNFLSWDIVDGWPSNIQFSFGKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGGKTNSSRVISVEGTTYNPNDGGIVDWTCYNMDVNLVAMAEICAVCNDAGIYFDGRLFRATGLPTEAALKVLVEKMGVPDMKSRNKIRDTQLAAKMIGCNTLKLGCCEWWNKRSKKIATLEFDRIRKSMSVIVREPDGQNRLLVKGAVESLLERSSYVQLADGSLVPTDEQCRELLLQRLLEMSSKGLRCLGMAYKDDLGEFSDYYADTHPAHKKLLDPACYSLIESGLVFVGVVGIRDPPRQEVHEAIEDCKKAGIRVMVITGDNRSTAEAICREIKLFSKDEDLTLKSLTGKEFTSLSHSEKVQILSRPGGKVFSRAEPRHKQDIVRLLKELGEIVAMTGDGVNDAPALKLADIGIAMGITGTEVAKEASDMVLADDNFSTIVSAIAEGRSIYNNMKAFIRYMISSNVGEVISIFLTAALGIPECMIPVQLLWVNLVTDGPPATALGFNPADVDIMQKPPRKSDDALISSWVLLRYLIIGSYVGIATVGIFVLWYTQASFLGINLVSDGHTIIELSQLRNWGECHSWSNFTAVPYTVGNGRVITFSNPCDYFSVGKVKAMTLSLSVLVAIEMFNSLNALSEDNSLRTLPPWRNPWLLLAMSMSLGLHCVILYIPLLNDVFGVVPLSLNEWFIVILISSPVILIDEILKFVVRSQRKMRKEKAA* 1054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g1065 1053 Gene3D - 32 252 - -
Lan17g1065 1053 Gene3D - 378 628 IPR023299 GO:0000166
Lan17g1065 1053 SUPERFAMILY HAD-like 366 833 IPR036412 -
Lan17g1065 1053 Gene3D - 66 1042 - -
Lan17g1065 1053 Gene3D - 365 774 IPR023214 -
Lan17g1065 1053 PRINTS P-type cation-transporting ATPase superfamily signature 186 200 - -
Lan17g1065 1053 PRINTS P-type cation-transporting ATPase superfamily signature 368 382 - -
Lan17g1065 1053 PRINTS P-type cation-transporting ATPase superfamily signature 621 632 - -
Lan17g1065 1053 PRINTS P-type cation-transporting ATPase superfamily signature 643 653 - -
Lan17g1065 1053 PRINTS P-type cation-transporting ATPase superfamily signature 729 748 - -
Lan17g1065 1053 PRINTS P-type cation-transporting ATPase superfamily signature 753 765 - -
Lan17g1065 1053 SFLD Haloacid Dehalogenase 349 781 - -
Lan17g1065 1053 PANTHER RETICULUM [ER]-TYPE CALCIUM ATPASE, PUTATIVE-RELATED 9 1050 - -
Lan17g1065 1053 SUPERFAMILY Calcium ATPase, transduction domain A 138 248 IPR008250 -
Lan17g1065 1053 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 375 625 IPR023299 GO:0000166
Lan17g1065 1053 Coils Coil 123 143 - -
Lan17g1065 1053 Pfam Cation transport ATPase (P-type) 433 546 - -
Lan17g1065 1053 PRINTS Sodium/potassium-transporting ATPase signature 361 382 - -
Lan17g1065 1053 PRINTS Sodium/potassium-transporting ATPase signature 982 1006 - -
Lan17g1065 1053 ProSitePatterns E1-E2 ATPases phosphorylation site. 370 376 IPR018303 -
Lan17g1065 1053 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 702 814 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lan17g1065 1053 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 306 393 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lan17g1065 1053 SUPERFAMILY Calcium ATPase, transmembrane domain M 13 1045 IPR023298 -
Lan17g1065 1053 Pfam E1-E2 ATPase 133 348 - -
Lan17g1065 1053 Pfam Cation transporting ATPase, C-terminus 814 1040 IPR006068 -
Lan17g1065 1053 SMART Cation_ATPase_N_a_2 13 88 IPR004014 -
Lan17g1065 1053 Pfam Cation transporter/ATPase, N-terminus 15 83 IPR004014 -
Lan17g1065 1053 PANTHER CALCIUM-TRANSPORTING ATPASE 9 1050 - -
Lan17g1065 1053 Pfam haloacid dehalogenase-like hydrolase 620 743 - -
Lan17g1065 1053 SFLD p-type atpase 349 781 IPR044492 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g1065 Lan-Chr17 17267835 17272597 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g1065 8 1051 Primary Pumps ATPases(2) AT4G00900 78.211 0.0 1696
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g1065 K01537 - gmx:100792952 1834.31