Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g1057 ATGGGGAAGAAGGGAAGTAGTTCTTGGTTAACTGCTGTCAAAAGGGCATTCAGATCTCCAACAAAAGATAGTGACAAAAGTAGTAGAAGAAGAGAGGACTATGATCATGAAGAAGATGAAGAAAAGAAGAGAGAAAAGAGAAGATGGATTTTCAGAAAGAATCATGAAACAGTGAACACTCAACAAACTCCAACAAAGTTGAAGCATGATGTGGCTACTACAACAAATACAAGTGTGACTTCAAGGACAGACCAAGATCAGAACCATGCACTTGCAATGGCTGTGGCCACCGCTGAGGCTGCTATGGCCACTGCTCAAGCTGCTGTGGAAGTTGCAAGGTTGACCAAGCCTATTAGTACTACTAATCATCACGCTAGGGACCATTTTGCTGCTATTGTGATTCAAACTGCTTTTAGAGGATATTTGGCGAGAAGAGCGCTTCATGCGCTTAAAGGGTTGGTGAAGTTGCAAGCTTTGGTAAGGGGCCATAATGTTAGGAAGCAGGCAAAGATGACCCTTAGATGCATGCAGGCTTTGGTTAGAGTACAAGCAAGGGTGCTTGATCAGCGCATAAGGTCTTCGCTTGATGGTAGTAGAAAATCTACCTTCAGTGACACCACCAGCGTTTGGGAATCGCGGTATCTTCAGGAAATTTCAGATAGGAAATCAGTATCAAGAGAGGGAAGCAGCGTTGCGGATGATTGGGATGAAAGGCCACACACAGTTGAAGAAGTTAAGGCTATGTTGCAGCAGAGGAAGGAAGCAGCTATGAAGCGAGAAAAGTCCTTGTCTCAAGCCTTTTCACAGCAGATTTGGAGGAATGATAGGACATCATCAATTGGAAATGAAGGTGAGCTGGAAGAGAGACCAAAATGGCTCGACCGATGGATGTCTACAAAGCCATGGGAGGGTAGGGGAAGAGCTTCAACTGATCAAAGAGACCCCATTAAGACCGTCGAAATTGACACCGCTCAGCCTTACTCATATCTAGGAGCTAGTTACAGAAGATCACATCCAAATTATCAATATAACCCACACCTCCAACCACAAAGACATTCCATTGCTTCCCCTATCCATGGAACACACCAAAATGGATCTATTCACCAATCCACCGCAACTCCGTCTCCAGCAAAATCAAGACCTATCCAAGTCCGGTCTGCGAGCCCTCGCTGTGTTAGAGAAGATAGAACAATCCACACCTCCCAAACACCAAGCCTTAGGTCTACTTATAATTACACTGGGAGCTTGTACCAGAATGGGAGGGTTGGAACAAGTAATGCTGCTGCTGCTGCATTGCCTAATTACATGGCTGCAACCGAGTCTGCAAAGGCTCGAATTCGATCTCAGAGTGCTCCAAGGCAGAGGCCATCAACACCAGAGAGGGACAGAGGAGCTGGATCAGTTAAGAAAAGGCTTTCATTCCCGGCTCCAGATCCTTATAATGTAGGAGCTGGTTATGGAAATTACGGGCAAAACTTAAGGAGTCCAAGCTTCAAGAGTGTAGGTGCATCACATTTTGGTACGGAACGGCAATCCAACTACTCTTCTTGCTGCACTGAGAGTAATGGTGGAGAGATTTCTCCTTCTTCAACCGGTGACCTTAGAAGATGGTTGAGATGA 1620 0.4556 MGKKGSSSWLTAVKRAFRSPTKDSDKSSRRREDYDHEEDEEKKREKRRWIFRKNHETVNTQQTPTKLKHDVATTTNTSVTSRTDQDQNHALAMAVATAEAAMATAQAAVEVARLTKPISTTNHHARDHFAAIVIQTAFRGYLARRALHALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRIRSSLDGSRKSTFSDTTSVWESRYLQEISDRKSVSREGSSVADDWDERPHTVEEVKAMLQQRKEAAMKREKSLSQAFSQQIWRNDRTSSIGNEGELEERPKWLDRWMSTKPWEGRGRASTDQRDPIKTVEIDTAQPYSYLGASYRRSHPNYQYNPHLQPQRHSIASPIHGTHQNGSIHQSTATPSPAKSRPIQVRSASPRCVREDRTIHTSQTPSLRSTYNYTGSLYQNGRVGTSNAAAAALPNYMAATESAKARIRSQSAPRQRPSTPERDRGAGSVKKRLSFPAPDPYNVGAGYGNYGQNLRSPSFKSVGASHFGTERQSNYSSCCTESNGGEISPSSTGDLRRWLR* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g1057 539 ProSiteProfiles IQ motif profile. 151 178 IPR000048 GO:0005515
Lan17g1057 539 MobiDBLite consensus disorder prediction 55 85 - -
Lan17g1057 539 Gene3D - 124 186 - -
Lan17g1057 539 MobiDBLite consensus disorder prediction 357 382 - -
Lan17g1057 539 Pfam IQ calmodulin-binding motif 154 170 IPR000048 GO:0005515
Lan17g1057 539 Pfam IQ calmodulin-binding motif 130 147 IPR000048 GO:0005515
Lan17g1057 539 MobiDBLite consensus disorder prediction 357 407 - -
Lan17g1057 539 MobiDBLite consensus disorder prediction 441 539 - -
Lan17g1057 539 PANTHER IQ-DOMAIN 5-RELATED 1 539 - -
Lan17g1057 539 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 123 171 IPR027417 -
Lan17g1057 539 PANTHER PROTEIN IQ-DOMAIN 1-LIKE ISOFORM X1 1 539 - -
Lan17g1057 539 SMART iq_5 126 148 IPR000048 GO:0005515
Lan17g1057 539 SMART iq_5 149 170 IPR000048 GO:0005515
Lan17g1057 539 MobiDBLite consensus disorder prediction 1 85 - -
Lan17g1057 539 ProSiteProfiles IQ motif profile. 127 155 IPR000048 GO:0005515
Lan17g1057 539 MobiDBLite consensus disorder prediction 488 529 - -
Lan17g1057 539 Pfam Protein of unknown function (DUF4005) 388 491 IPR025064 -
Lan17g1057 539 MobiDBLite consensus disorder prediction 18 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g1057 Lan-Chr17 16860839 16863660 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g1057 1 539 IQD Protein Family AT1G01110 56.174 9.29e-179 512
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g1057 - - gmx:100786729 813.527