Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g1055 ATGCCTGAAAACATGAGTATATCTGTGAATGGACAATCTCAAGTTCCCCCTGGCTTCCGTTTTCATCCAACTGAAGAAGAACTTCTTCAGTACTACTTGAGGAAGAAGGTCTCATATGAGAAGATTGACCTTGATGTGATTCGAGATGTTGATCTCAACAAGCTTGAACCATGGGACATACAAGAGAAATGCAAAATAGGAACCACCCCACAAAATGATTGGTACTTTTTCAGCCACAAAGACAAGAAGTATCCCACTGGAACTCGCACCAATCGTGCCACCGCTGCTGGGTTCTGGAAGGCCACTGGCCGTGACAAGGTAATATACAGCAACGGGAAGAGAATTGGAATGAGGAAGACACTGGTTTTCTACAAAGGTCGTGCACCTCATGGCCAAAAATCTGATTGGATCATGCATGAATATAGACTAGATGACAATAACACCAATGACACCACTCTTGTGTCTAATGCCATGGGAGATGGAGGCCAAGAAGAAGGATGGGTTGTGTGTAGAATATTCAAGAAGAAGAACCATCTCAAAACCCTAGACAGTCCTTTTACCTCTTCCATCTCTGGGGAAGGAAGAAGAAGCCATTTGTTTGATTCTTGTGATGATGGTGCCTTGGAGCAAATTCTTCAACAAATGGGAAGTGGCACTTGCAAGGAAGAGAACTATGAAGCCAAAAACTACAACAATGGAAGATATGCAAGGCCGTTTCACACAGGTATCATCAGCAATAATGGAAACTACCATGACAATAGGTTCATGAAACTCCCAAGCCTAGAGAGTCCAAAATCAATAAACATGGAGAGCCATCAAAATAACACTAATGATAACAATACTAATAATGGGTACCATCCCATTATTCCTGTAGATATGGTCACAGAAAATGAAGGATCATTCAAAACCCACCAGGACCCCAACATGGTTCATCATAATCCATTCGAGGCATCATCATCAATGGTGGTAGGATCAGGTGGCCTTACAAATTGGGCAGCCCTTGATAGACTTGTAGCTTCTCAGCTGAATGGCCAAACTGAACAAGGTTCAAGGCAATTTGCCTGCTTCAATGACCCTACTATGGGGTATTGCACTAGTGATCATGATCTTCAATTACCTACCCTCCGATCTTCATCAAACACAAGGGCTTCTTCTTCTGCTGCTGCTGCTTTCATTAGTCCTACACAAGATTATACTAGTGAGATTGACCTATGGAACTTTGCTCGATCCACGTCATCCTTGTTAACATCATCATCTGAAACAATATGCCACATGTCGAACACGTCAATGTAG 1293 0.4261 MPENMSISVNGQSQVPPGFRFHPTEEELLQYYLRKKVSYEKIDLDVIRDVDLNKLEPWDIQEKCKIGTTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVIYSNGKRIGMRKTLVFYKGRAPHGQKSDWIMHEYRLDDNNTNDTTLVSNAMGDGGQEEGWVVCRIFKKKNHLKTLDSPFTSSISGEGRRSHLFDSCDDGALEQILQQMGSGTCKEENYEAKNYNNGRYARPFHTGIISNNGNYHDNRFMKLPSLESPKSINMESHQNNTNDNNTNNGYHPIIPVDMVTENEGSFKTHQDPNMVHHNPFEASSSMVVGSGGLTNWAALDRLVASQLNGQTEQGSRQFACFNDPTMGYCTSDHDLQLPTLRSSSNTRASSSAAAAFISPTQDYTSEIDLWNFARSTSSLLTSSSETICHMSNTSM* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g1055 430 PANTHER NAC DOMAIN-CONTAINING PROTEIN 12 8 385 - -
Lan17g1055 430 SUPERFAMILY NAC domain 9 175 IPR036093 GO:0003677|GO:0006355
Lan17g1055 430 Pfam No apical meristem (NAM) protein 16 143 IPR003441 GO:0003677|GO:0006355
Lan17g1055 430 ProSiteProfiles NAC domain profile. 15 175 IPR003441 GO:0003677|GO:0006355
Lan17g1055 430 Gene3D NAC domain 24 180 IPR036093 GO:0003677|GO:0006355
Lan17g1055 430 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 8 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g1055 Lan-Chr17 16746343 16748861 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g1055 1 429 NAC Transcription Factor Family AT2G46770 53.303 8.90e-136 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan17g1055 NAM 4.1e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g1055 - - gmx:100793308 621.313