Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g1052 ATGGCTGCCAATAATGAACAAAACAAGTTGGGGCACAAAGATCTTGCTCATAAGAGTCTCCTTCAGAGTGATGAACTATTCCAGTATATACTTGAAACCAGTGTGTTTCCAAGAGAACACAAAAGCTTGAAAGAACTCCGTGAAATGACAGAAAAGCACCCTAGGAACCTCATGGCCACACCAGCTGATGAAGGACAATTTCTGAGCTTGTTGCTTAAGCTTATCAATGCTAAGAAGACAATCGAAATTGGTGTCTACACCGGTTACTCTCTGCTTTCCACTGCTCTAGCTATTCCCCATGATGGAAAGATTTTGGCTATGGATGTGAGCCGGGAATATTATGAACTGGGATTGCCCATAATTCAAAAAGCTGGGGTGGAACATAAGATTGACTTCAGAGAAGGACCTGCTCTTCCTCTTCTCGATGAACTGCTTAAAGATGAAAAGAACAAGGGATCATTTGATTTTGTGTTTGTGGATGCTGACAAGAACAACTACTTAAACTACCACCACAGGGTGATTGAGCTTGTGAAGGTTGGGGGGCTGATCGGGTACGATAACACCTTATGGGGTGGATCTGTTGTGGCCCCACCTGATGCACCTCTCATGGATTATGTCAAGCATTATCGTGGTTATATATTGGAGCTAAACAAATATCTTGCTGATGACTCAAGAATTGAGATTTGCCAGCTCCCAGTTGGTGATGGCATTACCCTTTGCCGCCGCCTCGTTTGA 735 0.4367 MAANNEQNKLGHKDLAHKSLLQSDELFQYILETSVFPREHKSLKELREMTEKHPRNLMATPADEGQFLSLLLKLINAKKTIEIGVYTGYSLLSTALAIPHDGKILAMDVSREYYELGLPIIQKAGVEHKIDFREGPALPLLDELLKDEKNKGSFDFVFVDADKNNYLNYHHRVIELVKVGGLIGYDNTLWGGSVVAPPDAPLMDYVKHYRGYILELNKYLADDSRIEICQLPVGDGITLCRRLV* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g1052 244 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 23 242 IPR029063 -
Lan17g1052 244 Pfam O-methyltransferase 33 243 IPR002935 GO:0008171
Lan17g1052 244 Gene3D Vaccinia Virus protein VP39 9 244 IPR029063 -
Lan17g1052 244 PANTHER O-METHYLTRANSFERASE-RELATED 5 243 - -
Lan17g1052 244 CDD AdoMet_MTases 81 183 - -
Lan17g1052 244 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 19 243 IPR002935 GO:0008171
Lan17g1052 244 PANTHER CAFFEOYL-COA 3-O-METHYLTRANSFERASE 5 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g1052 Lan-Chr17 16623437 16627051 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g1052 6 243 Monolignol Biosynthesis Gene Families AT4G34050 73.109 6.28e-136 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g1052 K00588 - gmx:100795858 399.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g0814 6 7508140 7509878 Lan17g1052 17 16623437 16627051 LSH