Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g1033 ATGCAAGTAAAAAAGACAGAACTAGACTCAATCTTCTATCACTTCCAACCACCAAATGCTACTACTAAAATTACCAACTCTATGTTGGAGCGATTAGGTTCTTCTGTGTACCTTAGACAAATAGACATGCTGCAAAATTTCTACAAAGAAACTGTAGTAAATGGGTCATTTGTTCCCACTACCACCAATTCCATGATAAGCACTTTGAAGAAAAAGGTGTATAGGGGAGTGAGACAAAGACAATGGGGTAAATGGGTGTCAGAGATTAGACTAACTCAGAATAGAAAGAGGGTGTGGCTTGGTACTTTTGACTCTCCTGAATCTGCTGCTTATGCTTATGATTGTGCCGCTTATAAGCTCAGAGGTGAATATGCACGTTTGAATTTCCCAAACCTTAATGACTCAAAAATATTATGTAACTTGTTAGGATTTGATGATTCAATGAGGTTAATTGCTTTGAAGAGCTCAGTGGATGCTAAAATTAAGGCAATATGTCATAAGGTGAAGAGGGAGAAAGCCAAGATCAAGAGTGATGCAAAGAAGCTTAGTTCGTTTGATACTAATATGAATAACAATGGTTATGGGGATACTGAGAAACCACAGAAGATAGAGTCAATGTCATTGTCTTGTTCTTCATCTTCTTTAATGTTGTCGGCATCAAGTTTTTGCGATGGTTTGAGAAATGAGTTTATTTCACCGAGTGCTTCAAATGAATGTGCAACAATGGTGACAGAGGAATCAGGTTTTGAAGATTGTTGTTCCTTGGCAAGGATGCCTTCCTTTGATCCTGAGTTGATTTGGGAAGTTCTGGGAAATTAG 819 0.3797 MQVKKTELDSIFYHFQPPNATTKITNSMLERLGSSVYLRQIDMLQNFYKETVVNGSFVPTTTNSMISTLKKKVYRGVRQRQWGKWVSEIRLTQNRKRVWLGTFDSPESAAYAYDCAAYKLRGEYARLNFPNLNDSKILCNLLGFDDSMRLIALKSSVDAKIKAICHKVKREKAKIKSDAKKLSSFDTNMNNNGYGDTEKPQKIESMSLSCSSSSLMLSASSFCDGLRNEFISPSASNECATMVTEESGFEDCCSLARMPSFDPELIWEVLGN* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g1033 272 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 5 271 - -
Lan17g1033 272 Gene3D AP2/ERF domain 73 131 IPR036955 GO:0003700|GO:0006355
Lan17g1033 272 ProSiteProfiles AP2/ERF domain profile. 73 130 IPR001471 GO:0003700|GO:0006355
Lan17g1033 272 CDD AP2 74 132 IPR001471 GO:0003700|GO:0006355
Lan17g1033 272 Pfam AP2 domain 73 123 IPR001471 GO:0003700|GO:0006355
Lan17g1033 272 PRINTS Ethylene responsive element binding protein signature 74 85 IPR001471 GO:0003700|GO:0006355
Lan17g1033 272 PRINTS Ethylene responsive element binding protein signature 96 112 IPR001471 GO:0003700|GO:0006355
Lan17g1033 272 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 5 271 - -
Lan17g1033 272 SUPERFAMILY DNA-binding domain 73 131 IPR016177 GO:0003677
Lan17g1033 272 SMART rav1_2 73 136 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g1033 Lan-Chr17 15559478 15560714 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g1033 8 272 AP2-EREBP Transcription Factor Family AT1G64380 41.026 1.05e-48 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Lan17g1033 AP2 1.6e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g1033 - - lang:109332433 365.155