Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g1024 ATGTCTTCTGGTAGATCAAGATCTGTAAGATTTCATGATGATATTGAAATAGATGAGTTAGCAGAATTGGAAAGCGAAGAGAGTGATCACCTATCAATGCTGGCCTATAAGATGAAGGACAGAAAAAAGCTTGGGAAGGATGCAATAGGCAAGTCATTGGCCGGAAGGGAACTTTCAAGGGTCTTTTCTGAGGATTATGATGCTGCAGAGATGTTGGTATTGGATCCTAGGGGGACTAGAGTAAATAGATGGAACAAAATTTTCTTAGTAGCATGTTTGATTTCATTGTTTGTGGATCCCTTGTTCTTTTACTTACCAGTTGCTAAGAAAGACAAGTGCACTGATATGTCTCTTGGTCTCGGAGTGTCACTTACCATAATTCGGTCCATGATTGATGCATTTTACATCATTCAGATTTATGTTCGGTTTCAAACTGCTTATGTCGCTCCTTCCTCTCGTGTTTCTGGTAGAGGAGAGCTTATCATAGATCCCTCTAAGATTGCATCAAATTACCTGCATAAAGACTTCTGGCTTGATTTAGTGGCTGCTCTACCGCTTCCACAGGTAATGATTTGGGCTGTAATTCCAAATCTAAGGGGGTCACAAATGATTGCATCAAGGCATGTTCTTCGCTTCGTTACCATTTTCCAGTACCTCTTGAGGTTGTATAGTATTTATCCTTTATCATCTGAAATCGTCAAGGTAAATGGAGTGATGATGGAAAAAGCTTGGGCTGGAGCTGCATATAATCTCACACTTTATATGCTTGCAAGTCATGTTTTAGGATCCTCTTGGTACCTGTTATCGATTGAACGGCAGGACGAATGTTGGAAGAAAGCTTGTACTCTTCAGTACCCGTACTGCCGATATCACTATCTTGATTGTCATAGCATAGGTGATCCAGATAGGTCTGCTTGGTTCAGATCAAGCAATCTCTCAGGTCTATGTGATCAGAACAGTGATTTCTTTCAGTTTGGCATTTTTGCTGATGCTCTGACTTTGGAAATTACTGCCTCAAAATTCCTCAACAAATACTATTACTGTCTATGGTGGGGACTAAAGAATCTCAGCTCTGTAGGGCAAAATCTCTCAACAAGCACACATGTTGCAGAGATAATTTTTGCTGTGATTGTCGCAATTCTTGGGTTGGTGCTTTTTGCATTGCTTATAGGCAATATGCAAACCTACCTTCAATCCACCACTATGAGGCTAGAGGAATGGAGAATAAGAAGGACAGATACAGAAAAATGGATGCATCACAGGCAGCTCCCGCGTTACCTGAAACAAAATGTGCGACGCTATGATCAATTCAAATGGGTTGCTACTCGTGGAGTTGATGAGGAAACTATCCTCAGAAACCTTCCTGTAGATCTTAGACGCGACATTAAACGCCATCTTTGCCTTAATCTTGTTCGACAAGTAAGCCTTTGCTTTCTTTTCTGCTTCTCCTTTCATAGAGAATTCTGTGAATTATGTAAGTTTTAA 1485 0.4054 MSSGRSRSVRFHDDIEIDELAELESEESDHLSMLAYKMKDRKKLGKDAIGKSLAGRELSRVFSEDYDAAEMLVLDPRGTRVNRWNKIFLVACLISLFVDPLFFYLPVAKKDKCTDMSLGLGVSLTIIRSMIDAFYIIQIYVRFQTAYVAPSSRVSGRGELIIDPSKIASNYLHKDFWLDLVAALPLPQVMIWAVIPNLRGSQMIASRHVLRFVTIFQYLLRLYSIYPLSSEIVKVNGVMMEKAWAGAAYNLTLYMLASHVLGSSWYLLSIERQDECWKKACTLQYPYCRYHYLDCHSIGDPDRSAWFRSSNLSGLCDQNSDFFQFGIFADALTLEITASKFLNKYYYCLWWGLKNLSSVGQNLSTSTHVAEIIFAVIVAILGLVLFALLIGNMQTYLQSTTMRLEEWRIRRTDTEKWMHHRQLPRYLKQNVRRYDQFKWVATRGVDEETILRNLPVDLRRDIKRHLCLNLVRQVSLCFLFCFSFHREFCELCKF* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g1024 494 Gene3D - 85 400 - -
Lan17g1024 494 SUPERFAMILY Voltage-gated potassium channels 75 398 - -
Lan17g1024 494 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 27 476 - -
Lan17g1024 494 PRINTS EAG/ELK/ERG potassium channel family signature 139 148 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lan17g1024 494 PRINTS EAG/ELK/ERG potassium channel family signature 256 266 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lan17g1024 494 PRINTS EAG/ELK/ERG potassium channel family signature 345 362 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lan17g1024 494 PRINTS EAG/ELK/ERG potassium channel family signature 371 382 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lan17g1024 494 PRINTS EAG/ELK/ERG potassium channel family signature 389 398 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lan17g1024 494 PRINTS EAG/ELK/ERG potassium channel family signature 439 446 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lan17g1024 494 Pfam Ion transport protein 84 403 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lan17g1024 494 SUPERFAMILY cAMP-binding domain-like 406 493 IPR018490 -
Lan17g1024 494 Gene3D Helix hairpin bin 403 467 - -
Lan17g1024 494 PANTHER PROTEIN CNGC15A 27 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g1024 Lan-Chr17 15185906 15189440 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g1024 50 476 Ion Channels AT2G28260 65.105 0.0 615
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g1024 K05391 - gmx:100815543 775.393