Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g1014 ATGGAGAGTGAGTTGAGATGGGAGCAGAACATACTCATCAATGAGCTAATTCAAGGGATGGAAGTAGCAAAACAGTTGAAGGAAGACTTGAAGACGCCATATTCAGTTGACACAATGGATATGCTGGTACAGAGGATATTATCATCTTATGAAAAGGCTCTACTGGTTCTAAATGCATCAGCGCCAAAGCCACTGAACATGAGTCCAGGGACAGCGACTTTGTTACCAGATTCACTGATTTCTTTCGCCGGAAGTCCTATCAGGGATGACAATGATGATGGAGCCATTAAGGGTGAGAAGGAGGTTAAAACTGATTCAAAGAAGAGAAAGACGACGACCAAATGGATAGAGCAAATAAGAGTGAGCTCAGAGAGTGGTGTTGATGGATCACATGAAGATGGCTACAACTGGAGAAAATATGGACAGAAAGACATACTTGGTACCAAATATCCAAGAAGTTACTATAGATGCACCTGCCGCAATACACAGGGCTGCCAGGCAACAAAGCAAGTACAGAGATCAGATGAAGATCCCACTATCTTTGACATAACTTACAGAGGAAAGCATACTTGTTCTCAGGGAAGCAATGCCCCTCTGATACCTAAGTCAATACACGAACAAGAGAAACCACACAATCATAATACTTATATTCATAACGCGAATCAACCGCAAGAAAGCCTTGCTATGCTCAGAAACAACTTAACTGTCAAGACAGATAATCTAGGGAATGAAGAAATGCCATGCCCATGTCCTTCCATTTTCCCTTCGACTTCATTTGGATGCATGACACAAGAAAACCACTTGCTTCCTATGGCCCTAGACAATTATCTTTTCCAAACACACTTATTATCGTCAACCACAACAGAATCAAACTATTTCCCATCTCCGTCTTTGCAGGTGAATGAGTTCGATTGGGTCTATAACAGGCCGAGGTCAGAATATGATATTCCTGAGATCATTTCCACAAACACATCAGCCACCAATTCTCCAATTCCTGAGTTCAATTTCTCACTTGATCCAGTGGAAATTAATCCAAATTTTCCTTTCAACACCTCAGGATTTTCCCCCTAA 1071 0.4164 MESELRWEQNILINELIQGMEVAKQLKEDLKTPYSVDTMDMLVQRILSSYEKALLVLNASAPKPLNMSPGTATLLPDSLISFAGSPIRDDNDDGAIKGEKEVKTDSKKRKTTTKWIEQIRVSSESGVDGSHEDGYNWRKYGQKDILGTKYPRSYYRCTCRNTQGCQATKQVQRSDEDPTIFDITYRGKHTCSQGSNAPLIPKSIHEQEKPHNHNTYIHNANQPQESLAMLRNNLTVKTDNLGNEEMPCPCPSIFPSTSFGCMTQENHLLPMALDNYLFQTHLLSSTTTESNYFPSPSLQVNEFDWVYNRPRSEYDIPEIISTNTSATNSPIPEFNFSLDPVEINPNFPFNTSGFSP* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g1014 356 SUPERFAMILY WRKY DNA-binding domain 130 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan17g1014 356 Gene3D WRKY domain 116 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan17g1014 356 Pfam WRKY DNA -binding domain 132 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan17g1014 356 ProSiteProfiles WRKY domain profile. 132 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan17g1014 356 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 352 IPR044810 GO:0003700
Lan17g1014 356 SMART WRKY_cls 131 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan17g1014 356 PANTHER WRKY TRANSCRIPTION FACTOR 41-RELATED 1 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g1014 Lan-Chr17 14845040 14846860 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g1014 5 348 WRKY Transcription Factor Family AT4G11070 38.873 1.98e-60 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan17g1014 WRKY 1.8e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g1014 - - gmx:100815760 482.256