Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0987 ATGGGAAACGGTCTCTCGAGTTTTTGTTCTTGTCTCGAACCGGCGAACCGGCCGAACCGCGACGAAGACGTTATTTTCTCAGCGGCTGAACCGTTAGACGAAACCCTAGGCCACTCTTTCTGCTACGTCAGATCCTCGAACCGGTTCATCTCACCGACTCATTCCGACCGATTTGTTTCTCCCTCTACCTCTCTTCGTTTCTCACCGGTTCATGAGCCCAAGAACCGAACCGATTCGCATGAAACCGGGTTCAAAGCCATTTCCGGAGCCTCCGTTAGCGCTAACAGCTCCGTCCCTAAAACCGTTATCCAGTTAGAAAACACTAACAGCGGAAATAGCAACAATGCCTTCGACGACGTCGTTTCAGATTATGGCGGCGCTGTATTGGTGAATGGTTTTGAAGGAACGTCGTCGTTTAGCGCTCTCCCGCTTCAGCCTGTGCCACGTGGCGGTGAGCCTTACGAGACGAGTGGTTTTTTCCTTTCTGGTCCGATTGAGAGTGGCGCCGCCGCGGATTGCGGCGGTGCCACCGGCGATGTTCCGTTTTCGGCTCCGTTGGGAGGGTTTTACGTGAAGAAGAAGAGGAGGAACGGGATTTCGTCGTTCAGGAAGGCTTTTCACCGGAACAACTCGTCGGAGAAGAAGCGACCGTGGGTGGTGCCGGTGTTGAACTTTGTCGGAAGAAAGGAAGTTCCGGCGAACGAGTTGAAGGAGGCAAAATTGGTGACGGAGGCAAAGAATGAGAGCAATGTGCAGTGGGCGCTTGGAAAAGCCGGCGAGGATCGTGTTCATGTAGTGGTTTCCGAGGAACAAGGGTGGCTGTTTGTTGGAATTTACGATGGTTTCAACGGCCCCGATGCGCCGGAGTTTCTGATGGGTAACCTTTACCGTGCAGTTCACAATGAGCTTCAGGGTTTGTTTTGGGAAATTGAAAAATCAGAGGAGAGTAATAACCCTTTGAATTTGAGTGTTGCTGCTGAAAGTTCAATGCTTGAAGAGGTTAAGAACAATGAGGGTGTTGTAACTGAAATTGATGTTGCAGAAGACTCGATTTCACGATCTGTGAAAAGAGTGACATTCCAAGCTGAGGGAACTGAAAGTAGAAGGCGTAGGCTGTGGGAATTTCTTGCTGAGGACCCTGAAGATGGACTTGATCTTTCGGGTTCTGATAGGTTTGCATTTTCTGTTGATGATGCTCTTAGTGTTAACAATGGCAATGCAGGGTCAGCAGTTAGTAGAAGATGGCTTTTGTTGTCGAAGTTGAAGCATGGATTGTCAAAGCATAAAGAGGGTCATAGTAGTAGGAAGTTGTTTGGGACTGAGGAGAAAGAGAAGGTTGAGGTGGAAAATCAAAATCCGGTAGAAGAGAAGCCTTCTGGTAGCAGCAGTGGTGGTAGTGGGAGGAAAAGGAAGGTCGGTCCTGTCGATCATGATTTGGTTTTGAGGGCAATGTCTAGGGCACTTGAAGTGACTGAGCTTGCATATTTGGATATGACGGATAGGCTTCTTGCCTCTAATCCGGAACTTGCTTTGATGGGTTCATGTTTGTTAGTTGTGTTAATGAGGGATGAGGATGTGTATGTGATGAATGTTGGGGATAGCAGAGCGATTGTGGCACACTATGAACCAAAGAACATTGGTTCTAATGTCGAATCGGGAAGTAAGGGAGCTAGAAGGTCAAGCACAGAGAGTATAATTGAGGAGTCTTTAGCTTTAGGTGAAGGTGAAAGTGCTAGAAAGTTGGGGAGTGAGGGTCCTGCTCAAGAAATGAGGTTGGCTGCATCACAGCTGTCCACTGATCACAGCACTAGCATTGAGGAAGAAATCATTAGAATTAAGAATGAACATCCTGATGATAACCATTGTATAGTCAATGATAGAGTAAAAGGCCGTCTTAAGGTCACCAGAGCATTTGGTGCAGGATTTTTGAAGCAGCCAAAGTTGAATGATGCAGTTCTAGAAATGTTCCGTAATGAATATATTGGCACTGCGCCATACATATCCTGCTGTCCTTCACTACGCCACCATAGATTATGCCCGACAGATCAGTTCTTGATCCTCTCGTCTGATGGGTTATATCAATATCTAGACAATGAAGAAGTGGTTTCTCAAGTTGAGAGCTTCATGGAAAAGTTTCCAGAAGGAGATCCTGCCCAACATTTAATAGAAGAGCTGCTCCTCCGTGCAGCCAAGAAGGCAGGAATGGATTTTCATGAGTTGCTGGATATCCCTCAAGGAGATCGGAGGAAGTACCATGATGATGTAACTGTTATGGTGATATCACTTGAAGGAAGAATCTGGAAATCGTCAGGGAAGTATCTGTGA 2325 0.4705 MGNGLSSFCSCLEPANRPNRDEDVIFSAAEPLDETLGHSFCYVRSSNRFISPTHSDRFVSPSTSLRFSPVHEPKNRTDSHETGFKAISGASVSANSSVPKTVIQLENTNSGNSNNAFDDVVSDYGGAVLVNGFEGTSSFSALPLQPVPRGGEPYETSGFFLSGPIESGAAADCGGATGDVPFSAPLGGFYVKKKRRNGISSFRKAFHRNNSSEKKRPWVVPVLNFVGRKEVPANELKEAKLVTEAKNESNVQWALGKAGEDRVHVVVSEEQGWLFVGIYDGFNGPDAPEFLMGNLYRAVHNELQGLFWEIEKSEESNNPLNLSVAAESSMLEEVKNNEGVVTEIDVAEDSISRSVKRVTFQAEGTESRRRRLWEFLAEDPEDGLDLSGSDRFAFSVDDALSVNNGNAGSAVSRRWLLLSKLKHGLSKHKEGHSSRKLFGTEEKEKVEVENQNPVEEKPSGSSSGGSGRKRKVGPVDHDLVLRAMSRALEVTELAYLDMTDRLLASNPELALMGSCLLVVLMRDEDVYVMNVGDSRAIVAHYEPKNIGSNVESGSKGARRSSTESIIEESLALGEGESARKLGSEGPAQEMRLAASQLSTDHSTSIEEEIIRIKNEHPDDNHCIVNDRVKGRLKVTRAFGAGFLKQPKLNDAVLEMFRNEYIGTAPYISCCPSLRHHRLCPTDQFLILSSDGLYQYLDNEEVVSQVESFMEKFPEGDPAQHLIEELLLRAAKKAGMDFHELLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGKYL* 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0987 774 Pfam Protein phosphatase 2C 595 730 IPR001932 -
Lan17g0987 774 MobiDBLite consensus disorder prediction 61 80 - -
Lan17g0987 774 CDD PP2Cc 476 762 IPR001932 -
Lan17g0987 774 MobiDBLite consensus disorder prediction 427 473 - -
Lan17g0987 774 SMART PP2C_4 244 760 IPR001932 -
Lan17g0987 774 MobiDBLite consensus disorder prediction 431 452 - -
Lan17g0987 774 Gene3D - 229 769 IPR036457 -
Lan17g0987 774 PANTHER PROTEIN PHOSPHATASE 2C 29 17 772 - -
Lan17g0987 774 ProSiteProfiles PPM-type phosphatase domain profile. 243 762 IPR001932 -
Lan17g0987 774 SUPERFAMILY PP2C-like 257 763 IPR036457 -
Lan17g0987 774 PANTHER PROTEIN PHOSPHATASE 2C 17 772 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0987 Lan-Chr17 13999368 14002017 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0987 1 774 PP2C-type Phosphatase Gene Family AT2G35350 57.457 0.0 810
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0987 - - mtr:MTR_4g098650 1037.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g0927 6 8636400 8641602 Lan17g0987 17 13999368 14002017 LSH