Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0984 ATGGCTCTTTGTATTTTCTGTCTTCTGCTCACCTTGCTTTTCATGCAAACTATGGCAGATACTTCATGTAGTACAGATTGTTTTGTTCAATCTAGGGCAGCATATTACCCAAATTCTGAAGTAAATGGCACAGACGTTGGAGCATGTGGATTTGGTTCCTTTGGTGCTACCATTAATGGCGGGGACGTATCAGCTGCATCGGATCTTTATCGAAATGGTGTTGGCTGTGGCGCCTGTTATCAGGTGAGGTGTACCAACAGTGCCTATTGCTCAAGCAATGGTGTCACTGTAGTGATAACTGACCAAGGCTCAGGGGATAACACTGATTTCATTCTTAGCAAAAGAGCCTTTGGTGGAATGGCTCAGACCCCAGACAAAGCTACTTCTCTATTAGCTCTTGGTGTAACTGATATTGAATATAGACGTGTTTCATGCAGCTACCCAAACAAAAACATAACAGTTAAGATAGTTGAAAGCAGCAGTAACCCTCATTTCTTGGCTTTTGTCATATGGTTTCAACAAGGAAAGAGAGACATAACAGCTGTGCAACTATGTGAGAGTGAGAACTTTGTGTGCAAGTTATTGGACAGGAGCCATGGGGCAGTTTGGACTAGTACCTCTCCACCTAATGGTCCTCTATCTTTAAGGATGTTGTTTAGTGATGAAGAAGGACAAGAAACATGGGTTGTTCCTGTTAATGACATACCTCAAGACTGGATTGCTGGAGAAACATACGATTCTGGGGTACAAGTTGATCAGTAG 762 0.4265 MALCIFCLLLTLLFMQTMADTSCSTDCFVQSRAAYYPNSEVNGTDVGACGFGSFGATINGGDVSAASDLYRNGVGCGACYQVRCTNSAYCSSNGVTVVITDQGSGDNTDFILSKRAFGGMAQTPDKATSLLALGVTDIEYRRVSCSYPNKNITVKIVESSSNPHFLAFVIWFQQGKRDITAVQLCESENFVCKLLDRSHGAVWTSTSPPNGPLSLRMLFSDEEGQETWVVPVNDIPQDWIAGETYDSGVQVDQ* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0984 253 Gene3D - 147 251 IPR036749 -
Lan17g0984 253 SUPERFAMILY PHL pollen allergen 157 247 IPR036749 -
Lan17g0984 253 Pfam Lytic transglycolase 67 140 IPR009009 -
Lan17g0984 253 Gene3D - 14 146 IPR036908 -
Lan17g0984 253 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 164 247 IPR007117 -
Lan17g0984 253 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 46 150 IPR007112 -
Lan17g0984 253 SUPERFAMILY Barwin-like endoglucanases 17 149 IPR036908 -
Lan17g0984 253 PRINTS Expansin/Lol pI family signature 45 63 IPR007118 GO:0005576
Lan17g0984 253 PRINTS Expansin/Lol pI family signature 133 149 IPR007118 GO:0005576
Lan17g0984 253 PRINTS Expansin/Lol pI family signature 233 247 IPR007118 GO:0005576
Lan17g0984 253 PANTHER POLLEN ALLERGEN ORY S 1, PUTATIVE-RELATED 7 252 - -
Lan17g0984 253 Pfam Expansin C-terminal domain 153 229 IPR007117 -
Lan17g0984 253 PANTHER EXPANSIN-B3 7 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0984 Lan-Chr17 13927893 13929726 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0984 9 249 Expansin Gene Family AT4G17030 44.262 6.08e-65 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0984 - - ccaj:109799868 426.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0937 18 14630735 14632916 Lan17g0984 17 13927893 13929726 PCT
Lan17g0984 17 13927893 13929726 Lan18g0937 18 14630735 14632916 PCT