Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0965 ATGGTAAAGCTGAATTCAGAAACATCACAAAAAATGGTTGCATCATTAAGTAATGGTCATTCTGAGGAAAAATTTGGGAAGCCACTGATGGAAAATGGGGATTGCAATTTTCTTGTTCTGCCTGAATATAAGCGGCGAAAAGTTTCAGTAATTCGTGATTTCCCAGAAGGATGTGGCCTGTTTGGTTCAAAGATCCATCCTAAACCCATTTTCCAAACATCCGACCTTAGTTTAATGAAGGAAGATCCGGTAGTCTCATCTCATATGCATGCACCACCTCCTTTGGCAAACAATGAGCCTGCTAATGAGCAGTTGGTGGGCATGGAAGCAGCTTTAGAAGATACAGAGTTGACAAGAACTCCGAAAGCTGTAAAGTGTAGTTCCATCAGTATGTCGAATTTGCCTCCTACAGTGGACGAGGTGGCATTTTTTGGTGGTTCAAAATTCTTATTATCTGATTGCAATATGTCTTGGTCCAGTTCTTGTTTGAAGAAGGCTGTAACTACAAGGTCTTTTCCTCGAAGAAAAGTTTCAGCTGTCAGAGACTTTCCTCCGTTGTGTGGAAAAAATGCTTCACATCTCAGGTTTGACAGTGAATGTCTAAATGGAATCTCTTCTTTGGAGAACAAGAGTAATGGTCTACAGAACATGGTTGTAGATGACAAGTCATTGGAAAAGGTAACAGCAACTGATGCAAAGGAAGTAATGGGCATAGTTCAAGCTGAAAATCAAGGGGATGATGCTACAACGAATGTGAAGACACTTGTTGTCTTTGAACCTTCTTCTACGATGCAATTGCCACCGGAAAGTGTAAGAGAAAGGTGCATTACAATTTTTGAAGAAGGGAATCATCACCAGGTTGAAATAAATTCCAAGGCAGAGGATATAGATGGAAATGGAGATGCTGTTCAGTTTGAGGGAACATCAGGGAAAGAGATTATAGTTCCCCCTGAATGCCAAAGTCATGAGACAAAGCCTTCAGAAATGCCTAATTGTCGGCATGAGCCAAAAGGAGGTTTTGATGGTTTGCAGGTTCATCACATGGTTGAAATAAATTCCAAAGCAGAAGATATAGATGGAAATGGAGATGCTGTACAGTTTGAGGGAACATCGGGGAAAGAGATTATAGTTCCCCCTGAATTCCAAAGTCATGAGACAAAGCCTTCAGAAATGCCTAATTGTTGTCATGAGCCAAAAGGAGGTTTTGATGGATTGCAGGTTGTACCTACCAAGACATTAGTGCTGGGCCTGGTGGCTGAATCTAAATATCCTTGGAGGCATGGTAAAGATTCCTCCAAATTGGATTTGATTGATGGTACAAATCAAAGCAAGCGAAAGAAAGTTGGTCTTTTTGCACAGCATGACATGTCAAAAGCTGATATGAGAAAAGAGTCACCAAATCATGCTGGGAAGAAGCCTTTACAAAAGAAAAAGCAAAATGCTGCTTCTGAAGGTTCAGGTCAATTGGTAATCTGGGAAAATAACAATTCTCATTATTCTAGTGAAGAAATTGGAGAATTTCGGGTCAACGAGAAATCACACGGTTCAAGTGTACAAGTTCCTTCTATTAGTCATCATAACAATGACTCAAATGTGACCCGCAATAAAGTGAGGGAAACATTGCGCTATTTCCATGCTGTTTATAGAAAGCTTTTGCATGAAGATGAATCAAGGATAAAAAGGCAAACAGATGGTCCTAGAATTTTTCATACACACGCAGCTAAGATCCTTAAAGAGCAACGGAAATATATTAACACAGGCAAACAGATCTTGGGATCTGTCCCTGGAGTTGAAGTTGGTGACGAATTTCAGTTCAGGTTGGAGCTTAATATTGTTGGCCTTCATCGGCAGGTTCAGGGTGGCATAGATTATGTGAATCACGATGGTAAGATCCTTGCCACAAGTGTTGTTGCGTCAGGGGGGCATGCTGATGAGTTAGATAATCCGCATGTCTTGATATATACAGGACAGGGTGGCAATTTGGTGAACTCTGATAAAGAACCTGAAGATCAGAAGCTTACGCGAGGCAATCTTGCTTTAAAGAACAGCAGCGAGGAAAAGAATCCTGTCAGGGTGATTCGTGGCTCTGAATCAACAGATGGAAAGCTAAGGAGATATGTTTATGATGGACAATATGTAGTTGACAGATATTGGCAAGATATGGGGCCACATGGTAAGCTGATTTTTAGGTTTCTGCTGCATAGAATCCCAGGTCAGCCAGAGCTTGCGTGGAAGGAAGTCGAAAAATCTAAAAAAATGAAGTTAAGAGAGGGTCTACGTATTAATGATATTTCTCATGGGAAAGAGCGAATTCCGATATGTGCTGTGAACACCATAGATAATGAAAAGCCCCCTCCATTTAAATACATAACTAGCATGATATATCCTAATTGGTGCAATCCTATTCCTCCGGAAGGATGTGACTGTATTGATGGATGCTCCGACAAAGAGAAATGTTCTTGTGCAGCGAAAAATGGCGGAGATATCCCATTCAATCACAATGGAGCTATTGTAGAAGCAAAGTCTTTAGTCTATGAGTGTGGACCTTCTTGCAAGTGCACTTCATGCTACAATAGAGTCAGCCAACGGGGCATAAAGCTTCAGCTTGAAATTTTTAAAACCGAGAAAAGAGGGTGGGGAGTGAGATCTATAAACTTCATCCCTTCAGGAACTTTTATTTGTGAATACACAGGAGAGCTTCTTGAAGAGAAAGATGTTGAACAAAGAACTGGCACTGATGAGTATCTTTTTGATATTGGGAATAACTACAACAATCATACTTCTTCGGATGAGCCTTTGACTGTTATACAGGATACACAGTCAATTTCTTGCGAAGTTGTGGAGGGCAACAGCTTCACCATTGATGCAGCCGAGTATGGTAATCTTGGGAGATTCATCAACCATAGTTGCTCTCCTAATCTCTATGCTCAAAATGTCCTTTATGATCACGACGACAAGAGGATTCCTCACATAATGCTCTTTGCTGCTGACAACATTCCTCCCTTTCAAGAGCTAACCTATGATTACAATTACAAGATAGATCAAGTCTTTGATTCTGATGGAAAAATAAAAAGGAAGAATTGCTACTGTGGTTCTGTGGAGTGCACTGGTAGGATGTATTAA 3123 0.4067 MVKLNSETSQKMVASLSNGHSEEKFGKPLMENGDCNFLVLPEYKRRKVSVIRDFPEGCGLFGSKIHPKPIFQTSDLSLMKEDPVVSSHMHAPPPLANNEPANEQLVGMEAALEDTELTRTPKAVKCSSISMSNLPPTVDEVAFFGGSKFLLSDCNMSWSSSCLKKAVTTRSFPRRKVSAVRDFPPLCGKNASHLRFDSECLNGISSLENKSNGLQNMVVDDKSLEKVTATDAKEVMGIVQAENQGDDATTNVKTLVVFEPSSTMQLPPESVRERCITIFEEGNHHQVEINSKAEDIDGNGDAVQFEGTSGKEIIVPPECQSHETKPSEMPNCRHEPKGGFDGLQVHHMVEINSKAEDIDGNGDAVQFEGTSGKEIIVPPEFQSHETKPSEMPNCCHEPKGGFDGLQVVPTKTLVLGLVAESKYPWRHGKDSSKLDLIDGTNQSKRKKVGLFAQHDMSKADMRKESPNHAGKKPLQKKKQNAASEGSGQLVIWENNNSHYSSEEIGEFRVNEKSHGSSVQVPSISHHNNDSNVTRNKVRETLRYFHAVYRKLLHEDESRIKRQTDGPRIFHTHAAKILKEQRKYINTGKQILGSVPGVEVGDEFQFRLELNIVGLHRQVQGGIDYVNHDGKILATSVVASGGHADELDNPHVLIYTGQGGNLVNSDKEPEDQKLTRGNLALKNSSEEKNPVRVIRGSESTDGKLRRYVYDGQYVVDRYWQDMGPHGKLIFRFLLHRIPGQPELAWKEVEKSKKMKLREGLRINDISHGKERIPICAVNTIDNEKPPPFKYITSMIYPNWCNPIPPEGCDCIDGCSDKEKCSCAAKNGGDIPFNHNGAIVEAKSLVYECGPSCKCTSCYNRVSQRGIKLQLEIFKTEKRGWGVRSINFIPSGTFICEYTGELLEEKDVEQRTGTDEYLFDIGNNYNNHTSSDEPLTVIQDTQSISCEVVEGNSFTIDAAEYGNLGRFINHSCSPNLYAQNVLYDHDDKRIPHIMLFAADNIPPFQELTYDYNYKIDQVFDSDGKIKRKNCYCGSVECTGRMY* 1041
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0965 1040 SMART PostSET_3 1024 1040 IPR003616 -
Lan17g0965 1040 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 440 1040 IPR025794 GO:0016571
Lan17g0965 1040 ProSiteProfiles Pre-SET domain profile. 805 864 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lan17g0965 1040 SUPERFAMILY PUA domain-like 573 748 IPR015947 -
Lan17g0965 1040 ProSiteProfiles YDG domain profile. 592 735 IPR003105 -
Lan17g0965 1040 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 495 1039 - -
Lan17g0965 1040 SMART G9a_1 587 739 IPR003105 -
Lan17g0965 1040 Gene3D SET domain 758 1040 IPR046341 -
Lan17g0965 1040 Pfam SET domain 878 1010 IPR001214 GO:0005515
Lan17g0965 1040 MobiDBLite consensus disorder prediction 1 27 - -
Lan17g0965 1040 MobiDBLite consensus disorder prediction 1 17 - -
Lan17g0965 1040 SUPERFAMILY SET domain 752 1017 IPR046341 -
Lan17g0965 1040 SMART set_7 867 1016 IPR001214 GO:0005515
Lan17g0965 1040 MobiDBLite consensus disorder prediction 450 471 - -
Lan17g0965 1040 SMART preset_2 761 852 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lan17g0965 1040 ProSiteProfiles Post-SET domain profile. 1024 1040 IPR003616 -
Lan17g0965 1040 MobiDBLite consensus disorder prediction 450 487 - -
Lan17g0965 1040 Pfam SAD/SRA domain 591 739 IPR003105 -
Lan17g0965 1040 Pfam Pre-SET motif 764 859 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lan17g0965 1040 ProSiteProfiles SET domain profile. 867 1010 IPR001214 GO:0005515
Lan17g0965 1040 Gene3D - 573 757 IPR036987 -
Lan17g0965 1040 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH6-LIKE ISOFORM X1 495 1039 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0965 Lan-Chr17 13569826 13575862 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0965 592 1037 Su(var)3-9 homologs AT5G04940 41.342 9.55e-110 354
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lan17g0965 SAD_SRA 2e-46 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0965 K11420 - lang:109331825 2137.07