Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0959 ATGAGTATGAAGGTCCTTTTTAAGCTGGTTACTTATTTTGTTACAGATATTTTGGCACATATAATTGACAGTCATAGCAAACTTTCAGTGACTAGAATCAACATGGTCTATACCCTTCAACATCAAGATCCATATGCAAACAATCCTCATCCAAGTGATTCTGAAATGGAGTCTTACAGTTCTGATCTGGATCAGTCAGAGTTCAGATCTGCAAGACGAACAGCAAACAGAAACACAACATTATGCACTCCTAGATCTCTGGGCACTGAAATAGTGCACTCTAGTGTGGGGTTGGCAGCAAGACGTGCACATGGTCGTGAAAGAGGTGGATGGGGTAGAAGGGGTGGTAGACTTGTTGGAGGGGATATTGGAAGGGGTATTACTTGGGGTAGACGGGGCAGACGGGGCAGACATGATAGGCAGGGTGGTACACTTGTTCAACAGGATAGTGGAGATGGTATTTGGGGTATTAGATGGGGCAGACAGGGAACACGTGGTACACTAGGTGGTAGACTCGTTGAAGGGGATAATGTAGGGGGTATTTGGGGTATTAGATGGGGCAGACGTGGCACACGAAGTCGCCCTTCTCAGATGAGTGAAGAAAGGTCTTGCAAAAAAACCATTTTGTCATGGTTGATACATTGTAAGTGTATCAATGAAGATGAATTGGTAGGCTATATGGATGGCACCAAGAAAACTGCAACTATGACGGGAAGAATTACCAGGGGTGCAATTCTTTGCAGTTGTTGCAAGAGGGAAAGATCCGTGTGGAACTTTGAGAAACATGTTGGAAGTGATCTTGGACGGCCATATGAACATATTTACCTCTTCAGTAAAGACAAATGCCTCCAGTACTACCAAATTGCTGCTTGTCTAAATGCCAGGGAACTAGAACGCCAGTGCATGTTTTCCTTTGTTCCGAAAGAAACTGATGCTGACCCGAATGATGATGTTTGTTTAATCTGTGGGGATGGGGGAGATTTAATCTGCTGTGATACGTGCCCCTCCACTTATCATCCATCTTGTATGAATATGGAGCTGGTTTGTTACTCTGAGTCTGAGTGGTACTGTCCATATTGCACATGCAAATACTGTGGGCTTGTAGAAGAGAGTAAGCCATTAGATACATGTTCCCAATGTGACAAAAAGTTTCATCGGCAGTGCTTTAAAGAATCTGGAAAAGAATTCTCAAACAATTTTTCGAGATTTTACTGTAGTTCAGGCTGTAAAGAGATACATGAGACATTGGAGGGTTCACTTGGAATTAGAAATGATCTATTTGCAAGTTACTCTTGGAGAGTAATCCGCCAAAGTGACATAATCCCCGAGGTGGTCTCTGCTACTAGGAACCAACAATTAGAAAATAATTCAAAGGTTGCAGTTGCTTGGATGTTGATGAATGAAGCTTTTCAGACAATAACTGATAGATACACGGGCATCGATGTGGTCCAAAGTGTGGTTTACAGTCGTGGATCAGATATAACCAGAATCAATTTTAGCCGTTTTTATACATTTGTCCTGGAGAAAGATGATGAGATCATCGCAGCAGCTTGTATTAGATTTCAAGGGAGAAGGATTGCGGAGATGCCTTTTGTTGCCACAGATGAAGCATACAGGCGCCAAGGAATTTGCAAGGTGTTAATGAGCGCAGTCGAATCGTTTCTATGCAACCTTAAGATTGAAAACCTGATCATTCCATCTGTTCCGGATATTTCTGAGATGTGGATGCACAAATATGGATTTGGTGAACTGAATGAAGAGTTGCAGAGTGAAATAACCTCCTGTAACATTCTGATGTTCCCTGGTTGTTTAAGACTGTACAAGAACTTATCTACATGCATGACAGACGGTGACAATGACCGAGAAGCACAAATGGATCAAACCGAAAGACCACTTCTGGACTTGAATGAGGAGCCTCCTCCAGAAGATTAG 1932 0.426 MSMKVLFKLVTYFVTDILAHIIDSHSKLSVTRINMVYTLQHQDPYANNPHPSDSEMESYSSDLDQSEFRSARRTANRNTTLCTPRSLGTEIVHSSVGLAARRAHGRERGGWGRRGGRLVGGDIGRGITWGRRGRRGRHDRQGGTLVQQDSGDGIWGIRWGRQGTRGTLGGRLVEGDNVGGIWGIRWGRRGTRSRPSQMSEERSCKKTILSWLIHCKCINEDELVGYMDGTKKTATMTGRITRGAILCSCCKRERSVWNFEKHVGSDLGRPYEHIYLFSKDKCLQYYQIAACLNARELERQCMFSFVPKETDADPNDDVCLICGDGGDLICCDTCPSTYHPSCMNMELVCYSESEWYCPYCTCKYCGLVEESKPLDTCSQCDKKFHRQCFKESGKEFSNNFSRFYCSSGCKEIHETLEGSLGIRNDLFASYSWRVIRQSDIIPEVVSATRNQQLENNSKVAVAWMLMNEAFQTITDRYTGIDVVQSVVYSRGSDITRINFSRFYTFVLEKDDEIIAAACIRFQGRRIAEMPFVATDEAYRRQGICKVLMSAVESFLCNLKIENLIIPSVPDISEMWMHKYGFGELNEELQSEITSCNILMFPGCLRLYKNLSTCMTDGDNDREAQMDQTERPLLDLNEEPPPED* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0959 643 Gene3D - 468 598 - -
Lan17g0959 643 Pfam Acetyltransferase (GNAT) domain 497 588 IPR000182 GO:0016407
Lan17g0959 643 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 464 611 IPR000182 GO:0016407
Lan17g0959 643 MobiDBLite consensus disorder prediction 618 643 - -
Lan17g0959 643 ProSitePatterns Zinc finger PHD-type signature. 319 360 IPR019786 -
Lan17g0959 643 MobiDBLite consensus disorder prediction 619 637 - -
Lan17g0959 643 CDD NAT_SF 505 565 - -
Lan17g0959 643 SUPERFAMILY FYVE/PHD zinc finger 312 368 IPR011011 -
Lan17g0959 643 SMART PHD_3 362 410 IPR001965 -
Lan17g0959 643 SMART PHD_3 318 361 IPR001965 -
Lan17g0959 643 ProSiteProfiles Zinc finger PHD-type profile. 316 363 IPR019787 -
Lan17g0959 643 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 306 374 IPR013083 -
Lan17g0959 643 PANTHER PHD FINGER PROTEIN 12 194 617 IPR042163 GO:0003714|GO:0045892
Lan17g0959 643 PANTHER GNAT FAMILY ACETYLTRANSFERASE 194 617 - -
Lan17g0959 643 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 480 584 IPR016181 -
Lan17g0959 643 SUPERFAMILY FYVE/PHD zinc finger 361 407 IPR011011 -
Lan17g0959 643 Pfam PHD-finger 319 363 IPR019787 -
Lan17g0959 643 Pfam Tify domain binding domain 238 278 IPR032308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0959 Lan-Chr17 13465986 13473348 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0959 203 610 PHD Transcription Factor Family AT4G14920 40.097 5.09e-98 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Lan17g0959 Acetyltransf_1 3.3e-05 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0959 - - lang:109331897 1186.79