Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0947 ATGGAAGGTGGAATGGTTGAAGATGTTTCATTTATAGGAGGGTTAATAGGGGTGCAATTTGTATATGCTGGAAATGCTGTGTTGTTGAGTTATCTTATGTCTTTGGGTCTTAACTCTCTTACCATTGTTATTTTCTCTTCCCTTGCTACATTCCTTATTCTTCTCCCTGTTGCTTTTTATTATGAAAGGAGTGTATGGCCTATGAAATTCAGTTTGAAGTTGTTCATACAGATACTCTTGCTTTCATTTGGAGGGGTAACCTTGTTGCAGTCTTTATTCCTTAAAGGAATCAATCTAACCTCGCCTTCAATGGGAACTGCCATGCCAAACCTTGCCCCTGGTCTTATCTTTGTCATTGCATGGACTTTTAGGTTGGAAAAAGTGGACCTAAGCTGCACATATAGTAAAGTAAAAGTTATTGGTACATTGCTTTGTGTCTTGGGAGCTCTCACAATGAGTATAATGTCAAGCCTTTCAATTTCTGCACCAAATAAAGAGGCAACAGTTCAATTAGTATCATCTCCACCACCAGATGTTTTGTTAGACAGACAGAAGATAATTGGTTGCCTCTATCTCTTGGCCGCAGTTTTCATGTTGTCTAGCAACATTGTCCTGCAGGCTTTTACTCTAGGCGATTTTCCGGCGCCAGTGTCCTTATGCGCGATAACATCCCTTTTCGGCGCGTTCATGACTGCAGCAACTCAATTAATTCAAGATCATGAATTCAAAACTAGTTGGTCACTTGTCAGTGTTAAAGACCTCATTGCCTATTCTCTTCTGGCAGGCACTGTGAATGGAATATGTCTAAGCTTCAATGGTTGGGCACTTAAAAAGAGGGGTCCAGTATTGGTATCCATGTTCAGCCCCATTGGCACAGTTTGCTCTGTCATTTTCTCCTATGTTACCTTTGGTGATACAATTAATATTGGAAGCTTTGGGGGTATGATCCTAATGTTCACTGGTCTCTACTTTGTACTATGGGCCAAAGGGAAAGAAGGGTATGCAAATGGAGATGGCTTAGACAGTGAGTTTGATGCAGGGAAACCTCTCTTAGTTTGA 1059 0.4089 MEGGMVEDVSFIGGLIGVQFVYAGNAVLLSYLMSLGLNSLTIVIFSSLATFLILLPVAFYYERSVWPMKFSLKLFIQILLLSFGGVTLLQSLFLKGINLTSPSMGTAMPNLAPGLIFVIAWTFRLEKVDLSCTYSKVKVIGTLLCVLGALTMSIMSSLSISAPNKEATVQLVSSPPPDVLLDRQKIIGCLYLLAAVFMLSSNIVLQAFTLGDFPAPVSLCAITSLFGAFMTAATQLIQDHEFKTSWSLVSVKDLIAYSLLAGTVNGICLSFNGWALKKRGPVLVSMFSPIGTVCSVIFSYVTFGDTINIGSFGGMILMFTGLYFVLWAKGKEGYANGDGLDSEFDAGKPLLV* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0947 352 PANTHER WAT1-RELATED PROTEIN 10 342 - -
Lan17g0947 352 Pfam EamA-like transporter family 187 326 IPR000620 GO:0016020|GO:0016021
Lan17g0947 352 Pfam EamA-like transporter family 16 153 IPR000620 GO:0016020|GO:0016021
Lan17g0947 352 SUPERFAMILY Multidrug resistance efflux transporter EmrE 250 330 - -
Lan17g0947 352 PANTHER WAT1-RELATED PROTEIN 10 342 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0947 Lan-Chr17 13144365 13148827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0947 1 343 Nodulin-like Gene Family AT5G47470 56.977 7.46e-139 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0947 - - gmx:100809182 545.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g0976 6 9168617 9171782 Lan17g0947 17 13144365 13148827 LSH
Lan17g0418 17 3104304 3108150 Lan17g0947 17 13144365 13148827 PCT
Lan17g0947 17 13144365 13148827 Lan17g0418 17 3104304 3108150 PCT