Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0943 ATGGCTCTTAATCTCTTAATCTCATTGCAGATACTTTTGGCTTTAACTTGCATAATGCATGCAGCAACTGTCACATGCACAGTTTCTTCTTCTTCTTCTTCAAACTCGTCCACCAAGCACAATTGGGTTGGACCAATTGGCCACCGTGTCATTAGCGTCGATGTTAATGGTGGTGGCCATTTCCGGTCAGTCCAAGCCGCCGTGAATGCTGTCCCGGAGAACAATAGAATGAACGTCTTTATACAAATCAGTGCCGGATATTACATAGAGAAAGTTGTGGTACCCGTGACAAAACCATACATAACATTTCAAGGAGAGGGAAGAGACGTGACAGTAATAGAATGGCATGATAGGGCAAGTGATCCTGGTCCCAACGGTCAACAACTTCGTACTTATAGAACTGCTTCTGTCACTGTTTTTGCCAACTATTTTTCTGCAAGGAACATTAGCTTCAAGAACACAGCGCCAGCACCAATGCCAGGGATGCAAGGATGGCAAGCCGCAGCGTTTAGGATATCAGGGGACAAAGCATACTTCTCTGGGTGTGGGTTCTATGGTGCTCAAGATACTCTTTGTGATGATGCTGGACGCCATTATTTCAAGGATTGCTACATTGAAGGTTCTATTGATTTCATTTTTGGTAATGGCAGATCCATGTACAAGGATTGCGAGCTGCACTCTATAGCAACAAGGTTTGGGTCCATAGCAGCCCAAGATAGGAAATCACCAAATGAGAAGACAGGCTTTGCATTCGTAAGGTGCAAGGTAACTGGTAAAGGCCCAGTTTATGTGGGCCGAGCAATGGGCCAATACTCAAGGATTGTCTATGCATATACATACTTTGCTGACATAGTTGCACATGGTGGTTGGGATGATTGGAACAATGCAGACAACAATAACAAGACTGTGTTCTTTGGAGTGTACAAGTGCTGGGGTCCAGGAGCAGCTGCAATAAGTGGTGTCTCATTAGCCCAAGAACTTGATTTTGAAGCAGCCCATCCGTTCCTTGTTAAGAGTTTTGTCAATGGGAGACACTGGATTGCACCCTCTGATGCTTAA 1059 0.4476 MALNLLISLQILLALTCIMHAATVTCTVSSSSSSNSSTKHNWVGPIGHRVISVDVNGGGHFRSVQAAVNAVPENNRMNVFIQISAGYYIEKVVVPVTKPYITFQGEGRDVTVIEWHDRASDPGPNGQQLRTYRTASVTVFANYFSARNISFKNTAPAPMPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKDCYIEGSIDFIFGNGRSMYKDCELHSIATRFGSIAAQDRKSPNEKTGFAFVRCKVTGKGPVYVGRAMGQYSRIVYAYTYFADIVAHGGWDDWNNADNNNKTVFFGVYKCWGPGAAAISGVSLAQELDFEAAHPFLVKSFVNGRHWIAPSDA* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0943 352 SUPERFAMILY Pectin lyase-like 48 349 IPR011050 -
Lan17g0943 352 Pfam Pectinesterase 52 343 IPR000070 GO:0030599|GO:0042545
Lan17g0943 352 ProSitePatterns Pectinesterase signature 2. 205 214 IPR033131 -
Lan17g0943 352 Gene3D - 47 351 IPR012334 -
Lan17g0943 352 PANTHER PECTINESTERASE 68-RELATED 13 351 - -
Lan17g0943 352 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 13 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0943 Lan-Chr17 13111381 13115220 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0943 2 352 Carbohydrate Esterase AT5G47500 70.787 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0943 - - gmx:100796327 600.512