Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0941 ATGAAGCACATAGAGAAATTAGAAAAACCAAAAAGAAAACCGACCCCCGTCACCTCATTACTTTGTTCACACCTCATTCTCAGTTCCAATTCTCTCTCTCTGAATTCAATTGTTCAAAACGAGATGAACACTGGGGAGCTTCTTAGCATCGAACCTCTCGAACTCAATTTCCCATTTGAGCTGAAGAAACAGATCTCGTGTTCTCTTCAATTATCTAATAAGACCGATAGCTATGTAGCTTTCAAGGTGAAAACAACCAATCCCAAGAAGTATTGCGTTCGTCCAAACACCGGAATTGTCATGCCGCGATCTACATGTGATGTTATGGTTACCATGCAAGCGCAAAAAGAAGCTCCACCTGATATGCAATGCAAGGATAAGTTTCTTCTTCAGAGTGTAAAAACTAATGATGGTGCAAGCCCGAAGGATATCTCTGCAGACATGTTCAACAAGGAGGCAGGACATGTGGTTGAAGAGTGCAAATTGAGAGTTGTGTATGTTTCACCACCACAACCACCATCTCCAGTCCCGGAAGGTTCAGAGGAGGGGTCATCGCCTAGAGGTTCGATTTCAGAAAATGGAATTCTAAATGGTTCTGACTTCACAGAAGTAGCAAGAGGATTTACTGAACGACCTGAGGCTCTAGAAAAATCTGCAGAGGCAAGAGCTCACATCTCAAGGCTGACTGAAGAAAAGAATAATGCAATTCAACAAAATAGCAAACTCCGTCAGGAACTGGAGCTTTTAAAGCGTGAAGGCAGCAAAAATCGCGGTGGTGTCTCGTTTGTCTTCATCATATTAATTGGACTACTTGGTATAATTATGGGGTATCTCCTGAAGAAGACCTAA 849 0.4229 MKHIEKLEKPKRKPTPVTSLLCSHLILSSNSLSLNSIVQNEMNTGELLSIEPLELNFPFELKKQISCSLQLSNKTDSYVAFKVKTTNPKKYCVRPNTGIVMPRSTCDVMVTMQAQKEAPPDMQCKDKFLLQSVKTNDGASPKDISADMFNKEAGHVVEECKLRVVYVSPPQPPSPVPEGSEEGSSPRGSISENGILNGSDFTEVARGFTERPEALEKSAEARAHISRLTEEKNNAIQQNSKLRQELELLKREGSKNRGGVSFVFIILIGLLGIIMGYLLKKT* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0941 282 Pfam MSP (Major sperm protein) domain 48 152 IPR000535 -
Lan17g0941 282 PANTHER VESICLE-ASSOCIATED PROTEIN 1-2-LIKE 42 280 - -
Lan17g0941 282 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 42 280 IPR016763 GO:0005789
Lan17g0941 282 ProSiteProfiles Major sperm protein (MSP) domain profile. 47 167 IPR000535 -
Lan17g0941 282 Coils Coil 218 252 - -
Lan17g0941 282 PIRSF VAMP_assoc_prot 40 281 IPR016763 GO:0005789
Lan17g0941 282 Gene3D Immunoglobulins 41 171 IPR013783 -
Lan17g0941 282 SUPERFAMILY PapD-like 37 182 IPR008962 -
Lan17g0941 282 MobiDBLite consensus disorder prediction 168 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0941 Lan-Chr17 13027992 13032315 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0941 - - lang:109330584 470.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g0982 6 9217518 9222201 Lan17g0941 17 13027992 13032315 LSH
Lan18g0904 18 14314362 14317893 Lan17g0941 17 13027992 13032315 PCT
Lan6g0348 6 2697184 2701079 Lan17g0941 17 13027992 13032315 PCT
Lan17g0941 17 13027992 13032315 Lan17g0407 17 3009276 3013589 PCT
Lan17g0941 17 13027992 13032315 Lan18g0922 18 14472162 14476495 PCT
Lan17g0941 17 13027992 13032315 Lan6g0325 6 2510506 2521632 PCT