Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0931 ATGTCAGCCTTCAACGCTCTTAGATCATCCAAATTTATCTCATGGAAACCCACCGGGAGGCTTCAGAAAACCCTAGCGGGTTGCGTAGAACGAAGGGGTAAGGGTTTACATTCCGGTGAAGTTTCCACCGTCAGATTGTGCCCTGGTTTTGCCGGCGAAGGGAGGAGCTTTTATTTTCGATCCAATTCGATTCCGGCATCTGTTGATTTCGCTCAAGTGTCGCCTCTCTGCACCACTTTGAGTAAAAGCGGTTTTCGGATTCGAACGGTGGAGCATTTGCTTTCTGCTTTGGAGGCTTCTGGTGTTGATAATTGCAGGATTGAGGTAGAGAATTTGGATGATGAAGGGTATGATGTGGAGATTCCTATATTTGATGGGTCAGCAAGGGAATGGGTGGCATCAGTAGAAGAAGTGGGTTTAAATGAAGCAACTGATCGTGATGGCAAAACTTGTGAGAAGATAGCGCCACATGTGAATGAACCAGTATATGTTTGGAGGAATGATTCTTTTGTTGCTGCGTTTCCTTCAGAAGTGGTTCAAATAACTTATGGCATCAGCTTTCCACAGGCACCTGCTATTGGCAGCCAGTGGTTTTCCACTAACCCCTTGGACAATTTGGTTTATTCTATGCAAATAGCTTTGTCAAGAACCTTCTGCATTTATGAGGAGGTTGAGCAAATGCGCAATGCTGGACTTATCAAAGGAGGTTCTCTAGAAAATGCCATTGTTTGCAGTACCAGTAAAGGTTGGTTGAATCCTCCTTTGCATTTCAGTGATGAACCATGTCGTCACAAAGTGTTGGATCTTATCGGTGATCTCTCACTTTCTGCTCAGTTTGGGAATCAAGGGCTCCCAGTGGCACACATTGTAGCTTACAAGGGTGGGCATGCGTTGCATGCTGATTTGGCATGTCGCCTGATGGGAATGATTTGA 933 0.4534 MSAFNALRSSKFISWKPTGRLQKTLAGCVERRGKGLHSGEVSTVRLCPGFAGEGRSFYFRSNSIPASVDFAQVSPLCTTLSKSGFRIRTVEHLLSALEASGVDNCRIEVENLDDEGYDVEIPIFDGSAREWVASVEEVGLNEATDRDGKTCEKIAPHVNEPVYVWRNDSFVAAFPSEVVQITYGISFPQAPAIGSQWFSTNPLDNLVYSMQIALSRTFCIYEEVEQMRNAGLIKGGSLENAIVCSTSKGWLNPPLHFSDEPCRHKVLDLIGDLSLSAQFGNQGLPVAHIVAYKGGHALHADLACRLMGMI* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0931 310 Pfam UDP-3-O-acyl N-acetylglycosamine deacetylase 22 307 IPR004463 GO:0008759|GO:0009245
Lan17g0931 310 SUPERFAMILY Ribosomal protein S5 domain 2-like 21 143 IPR020568 -
Lan17g0931 310 Gene3D lpxc deacetylase, domain 1 20 147 IPR015870 GO:0008759|GO:0009245
Lan17g0931 310 SUPERFAMILY Ribosomal protein S5 domain 2-like 160 307 IPR020568 -
Lan17g0931 310 TIGRFAM lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 22 304 IPR004463 GO:0008759|GO:0009245
Lan17g0931 310 PANTHER UDP-3-O-ACYL-N-ACETYLGLUCOSAMINE DEACETYLASE 1, MITOCHONDRIAL-RELATED 2 307 IPR004463 GO:0008759|GO:0009245
Lan17g0931 310 Gene3D lpxc deacetylase, domain 2 157 309 IPR011334 GO:0008759|GO:0009245
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0931 4 306 Carbohydrate Esterase AT1G25054 63.696 2.57e-142 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0931 K02535 - gmx:100814465 531.561