Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0912 ATGTTTTATCCTGGGGACGCGGTTTCAGGTGAAGGCTTCATCGCAAAGGACATAACCTTCGAGAACACAGCCGGACCACAGAAGCACCAAGCCGTGGCGCTCCGTTCCGGCGCCGATCACTCAGTATTCTACCGCTGCAGCTTCAAAGGCTACCAAGACACCTTATACGTGCACACTCAGCGCCAATTCTACCGCGACAGTGACATATACGGAACCGTAGACTTCATCTTCGGCGACGCCATAACAGTTCTTCAAAACTGCAACATTTATGTGAGAAAACCAATGAGTAACCAACAAAACACAGTCACAGCACAAGGGAGAACTGATCCTAATGAAAACACTGGCATCATCATTCATAATTCTCGTATAACTGCTTCTGGTGACTTGAAACCTATTCAAAGTAATTTTAAAACGTTTCTTGGAAGACCGTGGCAAAAGTATTCGAGGACTGTGATTTTGAAGAGTAATCTTGATGGGTTGGTTAACCCTTTGGGTTGGATTCCTTGGAGCGGAAGCTTTGCTTTGAGTACTTTGTATTATGGTGAATACATGAATATTGGAGCTGGTGCTAACACTAAAGGTAGGGTTAACTGGGTAGGTTTTCATGTGATAAATGATCCTAGTGAGGCTGTGAAATTCTCTGTTGGTGATTTCTTGAATGGGGACTCGTGGATTCCTGGTAGTGGTGTTCCATTTGATGTGGGGTTGTGA 711 0.4473 MFYPGDAVSGEGFIAKDITFENTAGPQKHQAVALRSGADHSVFYRCSFKGYQDTLYVHTQRQFYRDSDIYGTVDFIFGDAITVLQNCNIYVRKPMSNQQNTVTAQGRTDPNENTGIIIHNSRITASGDLKPIQSNFKTFLGRPWQKYSRTVILKSNLDGLVNPLGWIPWSGSFALSTLYYGEYMNIGAGANTKGRVNWVGFHVINDPSEAVKFSVGDFLNGDSWIPGSGVPFDVGL* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0912 236 PANTHER PECTINESTERASE INHIBITOR 5-RELATED 7 235 - -
Lan17g0912 236 ProSitePatterns Pectinesterase signature 2. 69 78 IPR033131 -
Lan17g0912 236 Pfam Pectinesterase 7 222 IPR000070 GO:0030599|GO:0042545
Lan17g0912 236 SUPERFAMILY Pectin lyase-like 7 235 IPR011050 -
Lan17g0912 236 Gene3D - 6 236 IPR012334 -
Lan17g0912 236 PANTHER PECTINESTERASE 7 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0912 Lan-Chr17 12001859 12003296 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0912 8 236 Carbohydrate Esterase AT3G60730 64.192 1.06e-110 326
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0912 - - lja:Lj4g3v3099630.1 412.92