Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0911 ATGGTTCTCTTCAACGTTTCCCGTAAAGATACCACTCCCTTCGATGGCCAGAAGCCTGGTACCTCTGGTCTACGCAAAAAGGTGAAAGTATTCATCCAACCTAACTACCTGGAAAACTTTGTTCAGGCATCATTCAATGCTTTAACCGCTGAAAAAGTTAGAGGTGCAACACTAGTTGTATCTGGTGATGGTCGTTATTATTCAAAGGAAGCTATTCAGATCATAACTAAAATGTCAGCAGCAAATGGAGTAAGACGTGTTTGGATTGGTCAAAATGGTTTGCTTTCAACTCCTGCTGTATCTGGTGTTATACGTGAAAGACTTGGGCCTGATGGATCAAAGGCAACTGGTGGATTTATACTGACAGCAAGCCACAATCCTGGTGGCCCTAATGAGGATTTTGGGATTAAATATAACATGGAAAATGGTGGACCAGCGCCAGAAGGAATTACTAACAAGATATATGAATACACAACGACAATTAAGGAATACTTTATTGCTGAAGATCTGCCAGATGTGGATATTACCACAACAGGTGTTACAAACTTCACAGGCCCTGAAGGACCCTTTGATGTTGAGGTTTTTGATTCAGCAAGGGATTATGTAAAATTGATGAAGTCAATTTTTGATTTTGAATCTCTCAGGAAACTGCTTTCATCTCCTAAATTTACATTCTGTTATGATGCACTACATGGAGTTGGTGGAGCTTATGCAAAGCGTATTTTTGTGGATGAGCTTGGGGCACAAGAAAGTTCTTTAATCAACTGTATTCCAAAGGAAGATTTTGGAGGAGGACATCCAGATCCCAATTTGACATATGCGAAAGAGTTGGTTGCTCGCATGGGATTGGGCAAATCAGAATCTCAAGGTGAGCCCCCAGAGTTTGGTGCTGCTGCTGATGGTGATGCAGATCGCAACATGATACTTGGAAAAGGGTTTTTTGTCACTCCTTCAGATTCTGTGGCCATCATTGCTGCAAATGCTGTTAAAGCTATACCATACTTTTCTGCTGGCTTAAAGGGAGTCGCCAGGAGCATGCCAACCTCTGCTGCCCTGGATGTTGTAGCCAAAAGCCTAAACTTGAAATTCTTTGAGGTACCCACAGGTTGGAAGTTCTTCGGTAATTTAATGGATGCTGGATTATGTTCAGTCTGTGGTGAAGAAAGTTTTGGAACTGGTTCGGACCATATTCGTGAAAAAGATGGAATCTGGGCAGTTTTGGCCTGGCTATCTATACTTGCATATAAAAATAAAGATAAGCTTGAAGACAAGCTTGTAACAGTTGAAGACTTAGTTCGTCAGCATTGGTCTACATATGGGCGCCACTATTATACTCGATATGACTATGAAAATGTAGATGCAGGTGCAGCAAAGGAACTGATGGCATATTTGGTCAAACTGCAGTCCTCACTTTCAGAAGTCAATCAGCTTATTAAGGAAGTAAGGTCAGACGTTTCAAATGTCGTCCATGCTGATGAATTTGAATACAAAGATTCCGTGGATGGTTCCATCTCGTCACATCAGGGCATCCGATATTTGTTTGAGGATGGATCACGATTGATTTTCCGCCTTTCTGGAACTGGATCAGAAGGTGCAACTATTCGACTATACATTGAGCAATATGAAAAGGATCCATCAAAGATTGGGAGGCTTTCACAAGATGCACTTGGTCCTCTTGTGGAGGTTGCATTGAAACTATCAAAGATGCAGGAATTCACAGGTCGATCTGCCCCAACAGTCATTACATAA 1749 0.4168 MVLFNVSRKDTTPFDGQKPGTSGLRKKVKVFIQPNYLENFVQASFNALTAEKVRGATLVVSGDGRYYSKEAIQIITKMSAANGVRRVWIGQNGLLSTPAVSGVIRERLGPDGSKATGGFILTASHNPGGPNEDFGIKYNMENGGPAPEGITNKIYEYTTTIKEYFIAEDLPDVDITTTGVTNFTGPEGPFDVEVFDSARDYVKLMKSIFDFESLRKLLSSPKFTFCYDALHGVGGAYAKRIFVDELGAQESSLINCIPKEDFGGGHPDPNLTYAKELVARMGLGKSESQGEPPEFGAAADGDADRNMILGKGFFVTPSDSVAIIAANAVKAIPYFSAGLKGVARSMPTSAALDVVAKSLNLKFFEVPTGWKFFGNLMDAGLCSVCGEESFGTGSDHIREKDGIWAVLAWLSILAYKNKDKLEDKLVTVEDLVRQHWSTYGRHYYTRYDYENVDAGAAKELMAYLVKLQSSLSEVNQLIKEVRSDVSNVVHADEFEYKDSVDGSISSHQGIRYLFEDGSRLIFRLSGTGSEGATIRLYIEQYEKDPSKIGRLSQDALGPLVEVALKLSKMQEFTGRSAPTVIT* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0911 582 Gene3D - 205 313 - -
Lan17g0911 582 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 317 439 IPR005846 GO:0005975|GO:0016868
Lan17g0911 582 Gene3D - 314 412 - -
Lan17g0911 582 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 200 309 IPR005845 GO:0005975
Lan17g0911 582 PANTHER PHOSPHOHEXOMUTASE FAMILY MEMBER 3 114 IPR045244 GO:0004614|GO:0005975
Lan17g0911 582 PANTHER PHOSPHOHEXOMUTASE FAMILY MEMBER 114 582 IPR045244 GO:0004614|GO:0005975
Lan17g0911 582 SUPERFAMILY Phosphoglucomutase, first 3 domains 199 315 IPR016055 GO:0005975|GO:0016868
Lan17g0911 582 Pfam Phosphoglucomutase/phosphomannomutase, C-terminal domain 489 543 IPR005843 GO:0016868|GO:0071704
Lan17g0911 582 ProSitePatterns Phosphoglucomutase and phosphomannomutase phosphoserine signature. 118 127 IPR016066 GO:0000287
Lan17g0911 582 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 17 164 IPR005844 GO:0005975|GO:0016868
Lan17g0911 582 Gene3D - 6 204 - -
Lan17g0911 582 CDD PGM1 11 582 - -
Lan17g0911 582 SUPERFAMILY Phosphoglucomutase, first 3 domains 4 229 IPR016055 GO:0005975|GO:0016868
Lan17g0911 582 MobiDBLite consensus disorder prediction 1 21 - -
Lan17g0911 582 PANTHER BNAA09G30060D PROTEIN 3 114 - -
Lan17g0911 582 PANTHER BNAA09G30060D PROTEIN 114 582 - -
Lan17g0911 582 SUPERFAMILY Phosphoglucomutase, C-terminal domain 441 582 IPR036900 GO:0016868|GO:0071704
Lan17g0911 582 Coils Coil 464 484 - -
Lan17g0911 582 Gene3D - 421 582 - -
Lan17g0911 582 PRINTS Phosphoglucomutase/phosphomannomutase family signature 117 131 IPR005841 GO:0005975|GO:0016868
Lan17g0911 582 PRINTS Phosphoglucomutase/phosphomannomutase family signature 222 241 IPR005841 GO:0005975|GO:0016868
Lan17g0911 582 PRINTS Phosphoglucomutase/phosphomannomutase family signature 258 271 IPR005841 GO:0005975|GO:0016868
Lan17g0911 582 PRINTS Phosphoglucomutase/phosphomannomutase family signature 293 308 IPR005841 GO:0005975|GO:0016868
Lan17g0911 582 SUPERFAMILY Phosphoglucomutase, first 3 domains 301 446 IPR016055 GO:0005975|GO:0016868
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0911 Lan-Chr17 11980939 11990611 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0911 17 11980939 11990611 Lan6g1098 6 10652797 10657466 LSH
Lan17g0911 17 11980939 11990611 Lan3g0315 3 2185523 2190101 PCT
Lan3g0315 3 2185523 2190101 Lan17g0911 17 11980939 11990611 PCT