Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lan17g0911 | ATGGTTCTCTTCAACGTTTCCCGTAAAGATACCACTCCCTTCGATGGCCAGAAGCCTGGTACCTCTGGTCTACGCAAAAAGGTGAAAGTATTCATCCAACCTAACTACCTGGAAAACTTTGTTCAGGCATCATTCAATGCTTTAACCGCTGAAAAAGTTAGAGGTGCAACACTAGTTGTATCTGGTGATGGTCGTTATTATTCAAAGGAAGCTATTCAGATCATAACTAAAATGTCAGCAGCAAATGGAGTAAGACGTGTTTGGATTGGTCAAAATGGTTTGCTTTCAACTCCTGCTGTATCTGGTGTTATACGTGAAAGACTTGGGCCTGATGGATCAAAGGCAACTGGTGGATTTATACTGACAGCAAGCCACAATCCTGGTGGCCCTAATGAGGATTTTGGGATTAAATATAACATGGAAAATGGTGGACCAGCGCCAGAAGGAATTACTAACAAGATATATGAATACACAACGACAATTAAGGAATACTTTATTGCTGAAGATCTGCCAGATGTGGATATTACCACAACAGGTGTTACAAACTTCACAGGCCCTGAAGGACCCTTTGATGTTGAGGTTTTTGATTCAGCAAGGGATTATGTAAAATTGATGAAGTCAATTTTTGATTTTGAATCTCTCAGGAAACTGCTTTCATCTCCTAAATTTACATTCTGTTATGATGCACTACATGGAGTTGGTGGAGCTTATGCAAAGCGTATTTTTGTGGATGAGCTTGGGGCACAAGAAAGTTCTTTAATCAACTGTATTCCAAAGGAAGATTTTGGAGGAGGACATCCAGATCCCAATTTGACATATGCGAAAGAGTTGGTTGCTCGCATGGGATTGGGCAAATCAGAATCTCAAGGTGAGCCCCCAGAGTTTGGTGCTGCTGCTGATGGTGATGCAGATCGCAACATGATACTTGGAAAAGGGTTTTTTGTCACTCCTTCAGATTCTGTGGCCATCATTGCTGCAAATGCTGTTAAAGCTATACCATACTTTTCTGCTGGCTTAAAGGGAGTCGCCAGGAGCATGCCAACCTCTGCTGCCCTGGATGTTGTAGCCAAAAGCCTAAACTTGAAATTCTTTGAGGTACCCACAGGTTGGAAGTTCTTCGGTAATTTAATGGATGCTGGATTATGTTCAGTCTGTGGTGAAGAAAGTTTTGGAACTGGTTCGGACCATATTCGTGAAAAAGATGGAATCTGGGCAGTTTTGGCCTGGCTATCTATACTTGCATATAAAAATAAAGATAAGCTTGAAGACAAGCTTGTAACAGTTGAAGACTTAGTTCGTCAGCATTGGTCTACATATGGGCGCCACTATTATACTCGATATGACTATGAAAATGTAGATGCAGGTGCAGCAAAGGAACTGATGGCATATTTGGTCAAACTGCAGTCCTCACTTTCAGAAGTCAATCAGCTTATTAAGGAAGTAAGGTCAGACGTTTCAAATGTCGTCCATGCTGATGAATTTGAATACAAAGATTCCGTGGATGGTTCCATCTCGTCACATCAGGGCATCCGATATTTGTTTGAGGATGGATCACGATTGATTTTCCGCCTTTCTGGAACTGGATCAGAAGGTGCAACTATTCGACTATACATTGAGCAATATGAAAAGGATCCATCAAAGATTGGGAGGCTTTCACAAGATGCACTTGGTCCTCTTGTGGAGGTTGCATTGAAACTATCAAAGATGCAGGAATTCACAGGTCGATCTGCCCCAACAGTCATTACATAA | 1749 | 0.4168 | MVLFNVSRKDTTPFDGQKPGTSGLRKKVKVFIQPNYLENFVQASFNALTAEKVRGATLVVSGDGRYYSKEAIQIITKMSAANGVRRVWIGQNGLLSTPAVSGVIRERLGPDGSKATGGFILTASHNPGGPNEDFGIKYNMENGGPAPEGITNKIYEYTTTIKEYFIAEDLPDVDITTTGVTNFTGPEGPFDVEVFDSARDYVKLMKSIFDFESLRKLLSSPKFTFCYDALHGVGGAYAKRIFVDELGAQESSLINCIPKEDFGGGHPDPNLTYAKELVARMGLGKSESQGEPPEFGAAADGDADRNMILGKGFFVTPSDSVAIIAANAVKAIPYFSAGLKGVARSMPTSAALDVVAKSLNLKFFEVPTGWKFFGNLMDAGLCSVCGEESFGTGSDHIREKDGIWAVLAWLSILAYKNKDKLEDKLVTVEDLVRQHWSTYGRHYYTRYDYENVDAGAAKELMAYLVKLQSSLSEVNQLIKEVRSDVSNVVHADEFEYKDSVDGSISSHQGIRYLFEDGSRLIFRLSGTGSEGATIRLYIEQYEKDPSKIGRLSQDALGPLVEVALKLSKMQEFTGRSAPTVIT* | 583 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lan17g0911 | 582 | Gene3D | - | 205 | 313 | - | - | |
| Lan17g0911 | 582 | Pfam | Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III | 317 | 439 | IPR005846 | GO:0005975|GO:0016868 | |
| Lan17g0911 | 582 | Gene3D | - | 314 | 412 | - | - | |
| Lan17g0911 | 582 | Pfam | Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II | 200 | 309 | IPR005845 | GO:0005975 | |
| Lan17g0911 | 582 | PANTHER | PHOSPHOHEXOMUTASE FAMILY MEMBER | 3 | 114 | IPR045244 | GO:0004614|GO:0005975 | |
| Lan17g0911 | 582 | PANTHER | PHOSPHOHEXOMUTASE FAMILY MEMBER | 114 | 582 | IPR045244 | GO:0004614|GO:0005975 | |
| Lan17g0911 | 582 | SUPERFAMILY | Phosphoglucomutase, first 3 domains | 199 | 315 | IPR016055 | GO:0005975|GO:0016868 | |
| Lan17g0911 | 582 | Pfam | Phosphoglucomutase/phosphomannomutase, C-terminal domain | 489 | 543 | IPR005843 | GO:0016868|GO:0071704 | |
| Lan17g0911 | 582 | ProSitePatterns | Phosphoglucomutase and phosphomannomutase phosphoserine signature. | 118 | 127 | IPR016066 | GO:0000287 | |
| Lan17g0911 | 582 | Pfam | Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I | 17 | 164 | IPR005844 | GO:0005975|GO:0016868 |
Showing 1 to 10 of 24 entries
Duplication type information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lan17g0911 | K01835 | - | gmx:100802789 | 1078.54 |
Showing 1 to 1 of 1 entries
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lan17g0911 | 17 | 11980939 | 11990611 | Lan6g1098 | 6 | 10652797 | 10657466 | LSH | |
| Lan17g0911 | 17 | 11980939 | 11990611 | Lan3g0315 | 3 | 2185523 | 2190101 | PCT | |
| Lan3g0315 | 3 | 2185523 | 2190101 | Lan17g0911 | 17 | 11980939 | 11990611 | PCT |
Showing 1 to 3 of 3 entries