Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lan17g0909 | ATGATGTTCAAACTTGCATGCTTTTTTTCTTTTTTGTTTATATTATTCACCAATTCCTCTAGCAGCAACAGCACTTCATCCTCAATAACTTGTCCCACTTACCATTGCACCAATGGACCTAACATCACTTACCCTTTCTGGTTATCCCAAGGTACCCCTCCTGACCAATACTGTGGTTACCCTGAATTTGGGCTTATATGTTCAGACCATGGTTACCCTATTTTCTCACCACCACCAGGATTATACTACTATTTGAAAGATATAGATTATATAAGCCATAATATTAAGCTAGTTGATGCTGATACTGCAAACCAAACATGTGCAAGAGCAGTTCACAGTGTTCCCATAGGAAACCTACCACTTTCTCATTCTCATTTAAACTTGAACCTTAGCTTTTATTTCAACTGCAGTGATTACCCTTATGGGGAACCAGTTGTGAAGTGTCTTAGTTCTGGTGTGAATGAGTCTTTTGTGTTTGTTTTGGGGGATGAGCCTCCGGGTTTTGACTGGTCAAAGAGTTGTGAGGAAAATGTTGTGGTGCCTGTGTTGAGAGATGAGGTTACACGTGATAACAACTTGGTCAATGAGTTTTCTGGGGCTATGAATGAAGGGTTTGTGCTTAATTGGCACACTTCTACCAGTTGTGTTGATTGTGAGGCTAGTGATGGACTTTGTGGATACAATAACAATAGGACTGAGTTGTTGTGCTTTTGCAAGGATGGAAGTGTAAGAAGCAATAAATGTGAAGGGGGAAGCAGCACCAGTTTATCAAGACTAAGTATAGGTTTAATATCAGGAGGAATTGGAGCACTACTGATAATATGCATTACAATTTTCAGTTTCAGACATAAATTATCACCAATTGTGCCAGAAATTTTGAAGCCAAAAAAGGTTGATCAAGATATTGAGGCCTTCATAAGAAATAATGGACCTCTAGCCATAAAAAGGTACTCTTATTCAGATATCAAGAAAATGACCAATTCTTTTGAATCCAAACTGGGACAAGGTGGCTATGGTCAAGTATATAAAGGTAATTTAAACAAAAATGTTCCAGTGGCTGTGAAGGTACTTAATGCTTCCAAAGGGAAAGGTGAAGAATTTATCAATGAGGTTATGAGCATAAGTAGAACATCACATGTAAATGTGGTTAATCTCCTTGGTTTTTGTGTTGACAGCCATAAAAATGCTCTTATCTACGAATTCATGCCAAATGGATCACTGGAAAAGTTCATAAACAACAAGGACTTTGAAACCAATCCACCTTTGAGTTGGGAAAGATTACACCAAATTGCAGAAGGGATAGCTAAAGGGCTAGAGTACTTGCATAGAGGCTGCAACACAAGGATTTTACATTTTGACATAAAACCAAGCAACATCCTCTTGGACAAAAACTTCAACCCGAAAATCTCGGATTTCGGGTTGGCTAAGCTATGCTCGAAAACACAAAGTATCATCTCTATGTTAGATGCAAGAGGGACAATAGGGTATATAGCTCCAGAAGTATGGAACAAAAACTTTGGAGGAGTGTCACATAAGTCCGATGTGTATAGCTATGGAATGCTGATTTTGGAAATGGTAGGAGGAAAGCAGAACAAAAGTACTGAAACAACTCATTCTAGTGAGACATATTTTCCTCATTGGATATACAAGCATATTGACGTTGGAAGCAATGCAGCATGGTATGATTATGATTTGACCATAGAGGAAAATGAAATTGTAAAGAAAATGATCATGGTAGGATTATGGTGCATTCAGACAAACCCATATGAGAGACCTCCAATGAGTAGGGTGATTGAAATGTTAGAAGGAAGAATAGAACAGTTGCAAATTCCACCAAAGCCATTCATATATTCTCCTACAAGACCATCTTGCACTACTAGTAATAGCTATGATTAA | 1896 | 0.3808 | MMFKLACFFSFLFILFTNSSSSNSTSSSITCPTYHCTNGPNITYPFWLSQGTPPDQYCGYPEFGLICSDHGYPIFSPPPGLYYYLKDIDYISHNIKLVDADTANQTCARAVHSVPIGNLPLSHSHLNLNLSFYFNCSDYPYGEPVVKCLSSGVNESFVFVLGDEPPGFDWSKSCEENVVVPVLRDEVTRDNNLVNEFSGAMNEGFVLNWHTSTSCVDCEASDGLCGYNNNRTELLCFCKDGSVRSNKCEGGSSTSLSRLSIGLISGGIGALLIICITIFSFRHKLSPIVPEILKPKKVDQDIEAFIRNNGPLAIKRYSYSDIKKMTNSFESKLGQGGYGQVYKGNLNKNVPVAVKVLNASKGKGEEFINEVMSISRTSHVNVVNLLGFCVDSHKNALIYEFMPNGSLEKFINNKDFETNPPLSWERLHQIAEGIAKGLEYLHRGCNTRILHFDIKPSNILLDKNFNPKISDFGLAKLCSKTQSIISMLDARGTIGYIAPEVWNKNFGGVSHKSDVYSYGMLILEMVGGKQNKSTETTHSSETYFPHWIYKHIDVGSNAAWYDYDLTIEENEIVKKMIMVGLWCIQTNPYERPPMSRVIEMLEGRIEQLQIPPKPFIYSPTRPSCTTSNSYD* | 632 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lan17g0909 | 631 | Pfam | Wall-associated receptor kinase C-terminal | 154 | 241 | IPR032872 | - | |
Lan17g0909 | 631 | SMART | serkin_6 | 327 | 601 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lan17g0909 | 631 | Pfam | Protein tyrosine and serine/threonine kinase | 329 | 601 | IPR001245 | GO:0004672|GO:0006468 | |
Lan17g0909 | 631 | PANTHER | RUST RESISTANCE KINASE LR10-RELATED | 12 | 627 | IPR045874 | GO:0004672 | |
Lan17g0909 | 631 | ProSitePatterns | Protein kinases ATP-binding region signature. | 333 | 355 | IPR017441 | GO:0005524 | |
Lan17g0909 | 631 | SUPERFAMILY | Protein kinase-like (PK-like) | 310 | 602 | IPR011009 | - | |
Lan17g0909 | 631 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 449 | 461 | IPR008271 | GO:0004672|GO:0006468 | |
Lan17g0909 | 631 | ProSiteProfiles | Protein kinase domain profile. | 327 | 616 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lan17g0909 | 631 | Pfam | Wall-associated receptor kinase galacturonan-binding | 31 | 99 | IPR025287 | GO:0030247 | |
Lan17g0909 | 631 | Gene3D | Phosphorylase Kinase; domain 1 | 303 | 401 | - | - | |
Lan17g0909 | 631 | Gene3D | Transferase(Phosphotransferase) domain 1 | 402 | 610 | - | - | |
Lan17g0909 | 631 | PANTHER | - | 12 | 627 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lan17g0909 | Lan-Chr17 | 11957721 | 11963097 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lan17g0909 | 32 | 622 | Receptor kinase-like Gene Family | AT5G38260 | 41.244 | 4.10e-147 | 439 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRK10L-2 | Lan17g0909 | PK_Tyr_Ser-Thr | 6.5e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lan17g0909 | - | - | gmx:100781977 | 882.093 |