Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0909 ATGATGTTCAAACTTGCATGCTTTTTTTCTTTTTTGTTTATATTATTCACCAATTCCTCTAGCAGCAACAGCACTTCATCCTCAATAACTTGTCCCACTTACCATTGCACCAATGGACCTAACATCACTTACCCTTTCTGGTTATCCCAAGGTACCCCTCCTGACCAATACTGTGGTTACCCTGAATTTGGGCTTATATGTTCAGACCATGGTTACCCTATTTTCTCACCACCACCAGGATTATACTACTATTTGAAAGATATAGATTATATAAGCCATAATATTAAGCTAGTTGATGCTGATACTGCAAACCAAACATGTGCAAGAGCAGTTCACAGTGTTCCCATAGGAAACCTACCACTTTCTCATTCTCATTTAAACTTGAACCTTAGCTTTTATTTCAACTGCAGTGATTACCCTTATGGGGAACCAGTTGTGAAGTGTCTTAGTTCTGGTGTGAATGAGTCTTTTGTGTTTGTTTTGGGGGATGAGCCTCCGGGTTTTGACTGGTCAAAGAGTTGTGAGGAAAATGTTGTGGTGCCTGTGTTGAGAGATGAGGTTACACGTGATAACAACTTGGTCAATGAGTTTTCTGGGGCTATGAATGAAGGGTTTGTGCTTAATTGGCACACTTCTACCAGTTGTGTTGATTGTGAGGCTAGTGATGGACTTTGTGGATACAATAACAATAGGACTGAGTTGTTGTGCTTTTGCAAGGATGGAAGTGTAAGAAGCAATAAATGTGAAGGGGGAAGCAGCACCAGTTTATCAAGACTAAGTATAGGTTTAATATCAGGAGGAATTGGAGCACTACTGATAATATGCATTACAATTTTCAGTTTCAGACATAAATTATCACCAATTGTGCCAGAAATTTTGAAGCCAAAAAAGGTTGATCAAGATATTGAGGCCTTCATAAGAAATAATGGACCTCTAGCCATAAAAAGGTACTCTTATTCAGATATCAAGAAAATGACCAATTCTTTTGAATCCAAACTGGGACAAGGTGGCTATGGTCAAGTATATAAAGGTAATTTAAACAAAAATGTTCCAGTGGCTGTGAAGGTACTTAATGCTTCCAAAGGGAAAGGTGAAGAATTTATCAATGAGGTTATGAGCATAAGTAGAACATCACATGTAAATGTGGTTAATCTCCTTGGTTTTTGTGTTGACAGCCATAAAAATGCTCTTATCTACGAATTCATGCCAAATGGATCACTGGAAAAGTTCATAAACAACAAGGACTTTGAAACCAATCCACCTTTGAGTTGGGAAAGATTACACCAAATTGCAGAAGGGATAGCTAAAGGGCTAGAGTACTTGCATAGAGGCTGCAACACAAGGATTTTACATTTTGACATAAAACCAAGCAACATCCTCTTGGACAAAAACTTCAACCCGAAAATCTCGGATTTCGGGTTGGCTAAGCTATGCTCGAAAACACAAAGTATCATCTCTATGTTAGATGCAAGAGGGACAATAGGGTATATAGCTCCAGAAGTATGGAACAAAAACTTTGGAGGAGTGTCACATAAGTCCGATGTGTATAGCTATGGAATGCTGATTTTGGAAATGGTAGGAGGAAAGCAGAACAAAAGTACTGAAACAACTCATTCTAGTGAGACATATTTTCCTCATTGGATATACAAGCATATTGACGTTGGAAGCAATGCAGCATGGTATGATTATGATTTGACCATAGAGGAAAATGAAATTGTAAAGAAAATGATCATGGTAGGATTATGGTGCATTCAGACAAACCCATATGAGAGACCTCCAATGAGTAGGGTGATTGAAATGTTAGAAGGAAGAATAGAACAGTTGCAAATTCCACCAAAGCCATTCATATATTCTCCTACAAGACCATCTTGCACTACTAGTAATAGCTATGATTAA 1896 0.3808 MMFKLACFFSFLFILFTNSSSSNSTSSSITCPTYHCTNGPNITYPFWLSQGTPPDQYCGYPEFGLICSDHGYPIFSPPPGLYYYLKDIDYISHNIKLVDADTANQTCARAVHSVPIGNLPLSHSHLNLNLSFYFNCSDYPYGEPVVKCLSSGVNESFVFVLGDEPPGFDWSKSCEENVVVPVLRDEVTRDNNLVNEFSGAMNEGFVLNWHTSTSCVDCEASDGLCGYNNNRTELLCFCKDGSVRSNKCEGGSSTSLSRLSIGLISGGIGALLIICITIFSFRHKLSPIVPEILKPKKVDQDIEAFIRNNGPLAIKRYSYSDIKKMTNSFESKLGQGGYGQVYKGNLNKNVPVAVKVLNASKGKGEEFINEVMSISRTSHVNVVNLLGFCVDSHKNALIYEFMPNGSLEKFINNKDFETNPPLSWERLHQIAEGIAKGLEYLHRGCNTRILHFDIKPSNILLDKNFNPKISDFGLAKLCSKTQSIISMLDARGTIGYIAPEVWNKNFGGVSHKSDVYSYGMLILEMVGGKQNKSTETTHSSETYFPHWIYKHIDVGSNAAWYDYDLTIEENEIVKKMIMVGLWCIQTNPYERPPMSRVIEMLEGRIEQLQIPPKPFIYSPTRPSCTTSNSYD* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0909 631 Pfam Wall-associated receptor kinase C-terminal 154 241 IPR032872 -
Lan17g0909 631 SMART serkin_6 327 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g0909 631 Pfam Protein tyrosine and serine/threonine kinase 329 601 IPR001245 GO:0004672|GO:0006468
Lan17g0909 631 PANTHER RUST RESISTANCE KINASE LR10-RELATED 12 627 IPR045874 GO:0004672
Lan17g0909 631 ProSitePatterns Protein kinases ATP-binding region signature. 333 355 IPR017441 GO:0005524
Lan17g0909 631 SUPERFAMILY Protein kinase-like (PK-like) 310 602 IPR011009 -
Lan17g0909 631 ProSitePatterns Serine/Threonine protein kinases active-site signature. 449 461 IPR008271 GO:0004672|GO:0006468
Lan17g0909 631 ProSiteProfiles Protein kinase domain profile. 327 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g0909 631 Pfam Wall-associated receptor kinase galacturonan-binding 31 99 IPR025287 GO:0030247
Lan17g0909 631 Gene3D Phosphorylase Kinase; domain 1 303 401 - -
Lan17g0909 631 Gene3D Transferase(Phosphotransferase) domain 1 402 610 - -
Lan17g0909 631 PANTHER - 12 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0909 Lan-Chr17 11957721 11963097 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0909 32 622 Receptor kinase-like Gene Family AT5G38260 41.244 4.10e-147 439
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Lan17g0909 PK_Tyr_Ser-Thr 6.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0909 - - gmx:100781977 882.093