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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Lan17g0906
ATGGCAGAACGTGGTGGCGGAGACCGTGGAGGCTTCGGCCGTGGCTTCGGCGACAGAGGCCGTGGAGGTCGCGGTGACAGAGGCCGTGGCGGCCGCCGCAGAGGTCCCCGTCGCGAAGAGGAAGAAAAATGGGTCCCAGTCACCAAACTCGGCCGTCTCGTAAAAGACGGTAAAATCCGTTCCCTCGAACAGATCTACCTTCACTCTCTCCCAATCAAAGAACACCAAATCATCGACACTCTTGTTGGACCCTCTCTCAAAGACGAAGTCATGAAAATCATGCCGGTTCAGAAACAAACCCGGGCCGGTCAGCGAACCCGGTTCAAGGCCTTTGTTGTTGTCGGTGACAATAACGGCCACGTTGGGCTCGGTGTTAAGTGCAGCAAGGAGGTTGCGACTGCGATTCGCGGCGCGATTATTCTCGCGAAGCTTTCAGTCATTCCAGTGAGAAGAGGGTATTGGGGTAATAAAATTGGGAAGCCTCACACTGTTCCGTGTAAGGTTACTGGGAAATGTGGTTCGGTTACTGTGAGGATGGTTCCTGCTCCTCGTGGTTCGGGAATTGTTGCTGCTAGGGTTCCTAAGAAGGTGCTTCAATTTGCTGGAATTGATGATGTTTTTACTTCGTCTAGGGGATCTACTAAGACTCTTGGAAATTTCGTCAAGGCCACCTTTGACTGTCTGCTGAAAACCTATGGTTTCCTAACACCCGAGTTCTGGAAAGAAACTCGCTTCTCCAAATCTCCATTCCAAGAGTACACAGATCTTTTGGCAAGGCCTACAACAAAGGCTTTGATCCTTGAGTCGGAGGAAAAGGTTGCTGAAGCTTGA
831
0.5138
MAERGGGDRGGFGRGFGDRGRGGRGDRGRGGRRRGPRREEEEKWVPVTKLGRLVKDGKIRSLEQIYLHSLPIKEHQIIDTLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWKETRFSKSPFQEYTDLLARPTTKALILESEEKVAEA*
277
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Lan17g0906
276
SUPERFAMILY
Ribosomal protein S5 domain 2-like
162
242
IPR020568
-
Lan17g0906
276
ProSiteProfiles
S5 double stranded RNA-binding domain profile.
86
149
IPR013810
GO:0003723|GO:0003735|GO:0005840|GO:0006412
Lan17g0906
276
MobiDBLite
consensus disorder prediction
1
42
-
-
Lan17g0906
276
Gene3D
-
43
148
-
-
Lan17g0906
276
PANTHER
40S RIBOSOMAL PROTEIN S2-1-RELATED
1
271
-
-
Lan17g0906
276
Pfam
Ribosomal protein S5, C-terminal domain
170
242
IPR005324
GO:0003735|GO:0005840|GO:0006412
Lan17g0906
276
Pfam
Ribosomal protein S5, N-terminal domain
86
150
IPR013810
GO:0003723|GO:0003735|GO:0005840|GO:0006412
Lan17g0906
276
ProSitePatterns
Ribosomal protein S5 signature.
103
135
IPR018192
-
Lan17g0906
276
Gene3D
-
149
242
IPR014721
-
Lan17g0906
276
SUPERFAMILY
dsRNA-binding domain-like
82
151
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Lan17g0906
Lan-Chr17
11892194
11893998
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Lan17g0906
40
260
Cytoplasmic Ribosomal Protein Gene Family
AT3G57490
92.308
1.62e-152
425
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Lan17g0906
K02981
-
gmx:100820352
463.381
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Lan17g0906
17
11892194
11893998
Lan6g1045
6
9975051
9976878
LSH
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