LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan17g0898	ATGGTGTCAAGATCTTATTCAAATCTGTTGGACCTAGCTTCTGGTGATTCTCTATCATTTGAGCACATGAACAGAAGAATTCCAAGGATTATGACTGTGGCTGGGTTGATATCTGAGGTTGATGATGATGAAAATGTAGATAGTGTGTGTTCTGACCCTTCTTCATCTGTGCAAACAGAAAGGATCATAATAGTGGCAAATCAGCTTCCTATAAAGGCTCAAAGGAAACCAGATGGTAACAAAAATTGGTTTTTTACTTGGGATGATAATTCACTTCTTCTCCAACTCAAAGATGAGTTAGGAGATTTTGATGATACTGAAGTTATTTATGTTGGATGCCTCAAAGAGGATGTGCACCCTAATGAACAAGATGAAGTTTCACAGATACTACTTGAGACCTTTAAATGTGTCCCAACTTTTCTCCCATCTGATTTGTATACCAGGTACTATCATGGCTTTTGCAAGCAACAATTATGGCCACTTTTTCATTATATGCTGCCTCTGTCACCAGAACTTGGTGGCAGGTTTAATAGGTCACTGTGGCAGGCTTATGTCTCAGTGAATAAGATTTTTGCAGATAGGATTATGGAAGTGATTAACCCTGAAGATGATTATGTTTGGATAAATGATTATCATCTTATGGTGTTGCCAACTTTCTTGAGGAAGAGGTTCAATAGAGTGAAACTTGGGTTCTTCTTACATAGTCCATTTCCCTCTTCAGAAATATATAAAACATTGCCTACTAGGGAAGAGTTGTTAAGGGCTCTCCTCAATTCAGATTTGATTGGATTCCATACTTTTGATTATGCTAGGCATTTTCTTTCATGTTGTAGTAGGATGCTTGGTCTTGCCTATGAATCCAAAAGGGGTTATATTGGTATTGAGTATTATGGTAGAACTGTTAGTATCAAAATTCTTCCTGTTGGAATACACATGGGTCAGCTTCAATCGGTTTTGAGTATGCCGAAGACCGAAGAAAAAGTTTGTGAGCTTGTTAAACAGTTTTCTGATCAAGGGAAGACAATGTTGCTTGGGGTGGATGACATGGATATATTTAAGGGAATAAGTTTGAAGCTTTTGGCCATGGAGCAGCTTCTCATTCAGCACCCTGAGTGTCAAGGAAAGGTTGTGTTGGTGCAGATTGCTAATCCTGCTAGGGGAAAAGGGAAAGATGTGAAAGAAGTGCAAGCCGAGACAAAAGCAACCGTGAAGCGTATTAACGAAACTTTTGGGAAGCCTGGTTATGATCCTGTGATTCTTATCGAGGAGCCACTCAGGTTTTATGAGAGAGTTGCATACTATGTTGTGGCTGAGTGTTGTTTAGTCACTGCAGTGAGGGATGGAATGAATCTCATACCGTACGAATATATAGTCAGTCGTCAAGGCAATGAAAGGTTGGATAAAGTTTTGGAACTAGGTTCCACCCCGAAGAAAAGCATGTTGGTTGTGTCTGAGTTCATTGGTTGTTCCCCATCTTTAAGTGGAGCGATCAGAGTGAACCCTTGGAACATTGATGCAGTGGTAGATGCAATGGACTCAGCTCTGGAAATGGCTGATTCGGAGAAACAGCTTAGGCACGAGAAGCATTACAGATATGTCAGTACTCATGATGTCGGGTATTGGGCTCGTAGCTTCTTGCAAGATTTGGAGAGGACTTGTCGTGATCATGTAAGGCGAAGATGGTGGGGAATTGGGTTTGGATTAAGTTTTAGGGTTGTGGCACTTGATCCAAACTTCAGGAAGCTCTCGATGGAGCACATAGTTTTGGTTTACAAGAGAACAAAAACTAGAGTGATCCTTCTAGATTATGATGGCACGCTAATGCCTCAGGCTTCTATTGATAAGAGTCCAACAAATGATTGCATTAAAATGCTTAACATTTTGTGTAGAGATAAGAACAACATGGTGTTTCTTGTCAGTGCTAGAAGCCGAAAGACACTTACTGAATGGTTTTCTCCTTGTGAGAACCTGGGAGTTGCCGCTGAGCATGGTTACTTTCTAAGATTAAAACGAGACGCAGAATGGGAAATGTGTGGACCAACAACAGATTGTAGTTGGAAGCAAATTGCAGAGCCTGTGATGAAGCTTTATACTGAAACTACTGATGGATCAACTATTGAAGATAAGGAGACATCACTTGTTTGGTGCTATGAGGATGCAGATCCAGATTTTGGATCATGCCAAGCTAAGGAACTTCTTGATCATCTCGAAAGTGTTCTTGCAAATGAACCGGTAACAGTCAAGAGTGGTCAGAATGTTGTAGAGGTTAAACCACAGGGTGTAAGCAAGGGGCTTGTGGCGAAACGCCTACTTTCCACAATGCAAGAAAAGGGAATGACACCTGATTTTGTTTTGTGTGTGGGGGATGACAGGTCTGATGAAGACATGTTTGAGGCAATCACCAGCTGCATGGCCAGCCCTTCCGCGGCACCCAGGGCTGAAGTATTTGCATGCACCGTCGGTCGAAAGCCCAGTAAGGCTAAGTACTATTTGGATGACACTGCTGAAATAGTGAGATTAGTGCAAGGTTTAGCATCTGTTTCAGAGCAACCAGTTTTATTTTAG	2565	0.414	MVSRSYSNLLDLASGDSLSFEHMNRRIPRIMTVAGLISEVDDDENVDSVCSDPSSSVQTERIIIVANQLPIKAQRKPDGNKNWFFTWDDNSLLLQLKDELGDFDDTEVIYVGCLKEDVHPNEQDEVSQILLETFKCVPTFLPSDLYTRYYHGFCKQQLWPLFHYMLPLSPELGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDYVWINDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPTREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLAYESKRGYIGIEYYGRTVSIKILPVGIHMGQLQSVLSMPKTEEKVCELVKQFSDQGKTMLLGVDDMDIFKGISLKLLAMEQLLIQHPECQGKVVLVQIANPARGKGKDVKEVQAETKATVKRINETFGKPGYDPVILIEEPLRFYERVAYYVVAECCLVTAVRDGMNLIPYEYIVSRQGNERLDKVLELGSTPKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVVDAMDSALEMADSEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCRDHVRRRWWGIGFGLSFRVVALDPNFRKLSMEHIVLVYKRTKTRVILLDYDGTLMPQASIDKSPTNDCIKMLNILCRDKNNMVFLVSARSRKTLTEWFSPCENLGVAAEHGYFLRLKRDAEWEMCGPTTDCSWKQIAEPVMKLYTETTDGSTIEDKETSLVWCYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNVVEVKPQGVSKGLVAKRLLSTMQEKGMTPDFVLCVGDDRSDEDMFEAITSCMASPSAAPRAEVFACTVGRKPSKAKYYLDDTAEIVRLVQGLASVSEQPVLF*	855

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan17g0898	854	TIGRFAM	T6PP: trehalose-phosphatase	595	844	IPR003337	GO:0003824\|GO:0005992
	Lan17g0898	854	PANTHER	TREHALOSE-6-PHOSPHATE SYNTHASE	1	850	IPR001830	GO:0003824\|GO:0005992
	Lan17g0898	854	SUPERFAMILY	HAD-like	597	844	IPR036412	-
	Lan17g0898	854	Gene3D	Glycogen Phosphorylase B;	317	534	-	-
	Lan17g0898	854	PANTHER	ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 6	1	850	-	-
	Lan17g0898	854	Pfam	Glycosyltransferase family 20	61	550	IPR001830	GO:0003824\|GO:0005992
	Lan17g0898	854	Gene3D	Glycogen Phosphorylase B;	54	316	-	-
	Lan17g0898	854	Pfam	Trehalose-phosphatase	600	834	IPR003337	GO:0003824\|GO:0005992
	Lan17g0898	854	Gene3D	-	596	728	IPR023214	-
	Lan17g0898	854	Gene3D	-	729	852	IPR023214	-
	Lan17g0898	854	CDD	GT20_TPS	61	550	IPR001830	GO:0003824\|GO:0005992
	Lan17g0898	854	CDD	HAD_TPP	598	839	-	-
	Lan17g0898	854	TIGRFAM	HAD-SF-IIB: HAD hydrolase, family IIB	599	800	IPR006379	-
	Lan17g0898	854	SUPERFAMILY	UDP-Glycosyltransferase/glycogen phosphorylase	61	553	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan17g0898	Lan-Chr17	11723479	11735459	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lan17g0898	1	850	Trehalose Biosynthesis Gene Families	AT1G68020	79.861	0.0	1439

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan17g0898	K16055		-	vvi:100252552	1501.49