Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0897 ATGGGTAGCACCGAACACATAACAAGCATTGAACCTGAGAAAGAGAGCCTTCTCAACAAGCACACCGAGAATCACTTCACTGCCGGCGACGTCGTCCGTGACATCATTATCGGTGTCTCCGACGGACTCACCGTTCCTTTCGCCCTCGCCGCTGGTCTCTCAGGCGCTAATGCCACCTCCACCATTGTCCTCACCGCAGGCATAGCCGAAGTTGCAGCTGGTGCCATCTCCATGGGACTTGGCGGGCATCTGGCAGCAAAGAGTGAAGCTGATCATTACGCGAGAGAACTGAAAAGGGAGCAAGACGAAATCGTTGCTGTACCTGATACTGAAGCGGCAGAGGTAGCAGAAATTCTGGCTCAATATGGGATTGAAGAACATGAATATAGACCTGTGGTGAATTCTCTCAGAAAGAATCCTGAAGCATGGTTGGATTTCATGATGAAGTTTGAGTTGGGACTAGAGAAGCCAGATCCAAGAAGAGCATTGTATAGTGCAATGACAATAGCCATTGCTTACATATTGGGTGGGATTGTTCCTCTCCTTCCTTATATGTTCATTCCAAGTGCAGCAGAAGCAGTTGTTTTTTCAGTTGTGGTTACCTTGATTGCATTGTTAATCTTTGGCTTTGCTAAGGGATACTTCACAGGTAATAAACCCTTCAGGAGTGCTATAGAAACTGCTCTAATTGGTGCTATTGCCTCTGCAGCTGCTTTTGGTTTGGCAAAGGCTTTCCATTCATAG 744 0.4718 MGSTEHITSIEPEKESLLNKHTENHFTAGDVVRDIIIGVSDGLTVPFALAAGLSGANATSTIVLTAGIAEVAAGAISMGLGGHLAAKSEADHYARELKREQDEIVAVPDTEAAEVAEILAQYGIEEHEYRPVVNSLRKNPEAWLDFMMKFELGLEKPDPRRALYSAMTIAIAYILGGIVPLLPYMFIPSAAEAVVFSVVVTLIALLIFGFAKGYFTGNKPFRSAIETALIGAIASAAAFGLAKAFHS* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0897 247 Pfam VIT family 32 242 IPR008217 GO:0005384|GO:0030026
Lan17g0897 247 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 9 246 IPR008217 GO:0005384|GO:0030026
Lan17g0897 247 Coils Coil 83 103 - -
Lan17g0897 247 PANTHER VACUOLAR IRON TRANSPORTER 1.1-LIKE 9 246 - -
Lan17g0897 247 CDD CCC1 11 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0897 Lan-Chr17 11686112 11690312 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0897 1 247 Nodulin-like Gene Family AT3G43660 24.194 1.08e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0897 K22736 - gmx:100793585 389.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0897 17 11686112 11690312 Lan6g1036 6 9889971 9893499 LSH