Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0892 ATGGTGGGGCCGAATCATTTACCAGAGGGAAGTGATAGATATTGGGTTAGGGCTCTTATGAATAGCAGCTTTGGGTATTGTGATGATCACCTTGATCTTAGGTCCAACGAGAAGAACGTGTTCTGTATAGATTGTGAAGTTAGAATGTGTAGGCACTGTAAGGAAGCTCATTCCCTTCATAGAACGTTTCAGATATACAAGTACTCTTATCAGGATGTGTTTCGCCATTCCGAGCTGCAGAAGTATTTTGACTGCTCTAAAATTCAGACTTACATATCCAATAATGAAAGGATTGTGCATCTCAAACCCCGGCCTTCAATCAGTAAACCTAAATCTGCTGATTTAAGTCCCGAGTCTAAATCCAAAGAAAGCAACTTACCAATAAGACCAAAGGCAGGTGGTACTTGTAAAGAATGTGGAAAACACTTACAAGATGAGCGTAATCGCTTCTGTTCCATTACATGCAAGGTCTCATTACATCCAGTGGAGCCTCAAAATCACTATTCACAAAGGAAGAGTTCAGAGTGCACCACAGCTCCAAAACCTGATCCTGCTGATTGTACTTTGAATGATAACCCTAATTCAGAACCAGAGTCATCTATATCTGAAGCTCAACCATGTGAATTGATTGAAGTTGTGAATTTCAGAAAGCGCCCAAGAAAAACAGCCCCTCTTCAAAGACCTTCTTTTGTTTTCACATCTTAG 705 0.4057 MVGPNHLPEGSDRYWVRALMNSSFGYCDDHLDLRSNEKNVFCIDCEVRMCRHCKEAHSLHRTFQIYKYSYQDVFRHSELQKYFDCSKIQTYISNNERIVHLKPRPSISKPKSADLSPESKSKESNLPIRPKAGGTCKECGKHLQDERNRFCSITCKVSLHPVEPQNHYSQRKSSECTTAPKPDPADCTLNDNPNSEPESSISEAQPCELIEVVNFRKRPRKTAPLQRPSFVFTS* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0892 234 MobiDBLite consensus disorder prediction 102 129 - -
Lan17g0892 234 ProSiteProfiles Zinc finger B-box type profile. 22 65 IPR000315 GO:0008270
Lan17g0892 234 MobiDBLite consensus disorder prediction 188 202 - -
Lan17g0892 234 Pfam PLATZ transcription factor 67 157 IPR006734 -
Lan17g0892 234 SUPERFAMILY B-box zinc-binding domain 17 67 - -
Lan17g0892 234 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 13 221 - -
Lan17g0892 234 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 13 221 - -
Lan17g0892 234 MobiDBLite consensus disorder prediction 164 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0892 Lan-Chr17 11627945 11630087 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Lan17g0892 PLATZ 3.9e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0892 - - gmx:100815813 351.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0892 17 11627945 11630087 Lan6g1033 6 9860823 9862941 LSH