Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0890 ATGGAGAAACCTCAATTGGGTTTTGGAGTTTCTTCATTACATTGTTTTCTTTTGGTTCTCTCTGTGATTTTTATCACAGCCAGGGGCCAGGATTATGAGGTGATGATATTGTTGAAGAGAATGATCATCAATGCCCCCAGCACTTTACAATGGACAGATCCTGATGTATGCAAATGGAATCACATTCAATGTGACAAAGGAAACCGTGTCACTGCTATTCAAATTGGTAACCAAACCCTTCAAGGTTCTCTCCCAAAGGAACTAGAGAATCTTTCACAGTTAAAACGTTTTGAATGTCAAGGAAACAATTTAACTGGTGCTTTCCCTTACCTTTCAAAATCCTTACAAAAGTTGTTGATTCATGGCAACATGTTCAGCTCATTCCCCAATGATTTCTTCATGGCTATGAGCAATTTGGAAGAAGTGAGATTAGATGAAAACCCTTTCCCTCAATGGCAGGTTCCTAGTAGTCTAAAGGAATGTCTTGCTCTCCAATCTTTCAGTGCTCAAAGTGTTGGTTTTGTTGGGACAATCCCAGATTTTTTTGGCAATGGTGGTCCTTTCCCTGGCTTGGTTTACTTGGCCTTATCTCGCAATTATTTCGAAGGTGTTTTGCCTGCAAGCCTTTCGGGTAGTTCAATAGAGACCCTATTGGTGAATGGACAGAATAGCAAGACTAAACTCAATGGTACCCTTGAGGTGTTGAAGAATATGACATCCCTGAAGCAAATTTGGGCACATGGTAATTCATTCACAGGTCCTATACCTCGTTTGTCACACCATGACCAACTTTTTGATGTGAGTTTGAGGGATAACCAGTTAACTGGTGTTATTCCACCCTCTCTCATGGCTCTTCCAAGACTTAAGGTTGTAAGTTTGACCAATAATCATTTTCAAGGGTCCCCTCCAGTGTTCCAAATTGGGGTAAGAGTTGATAATAATATGGATAATGGGAGAAATCAGTTTTGCACAAAGGTGGCAGGGGAGCCTTGTAGTCCCTTAGTGAATGCTTTACTATCTGTTGTTGAACCTTTGGGGTATCCTCTCAAGTTTTCGGAAAGTTGGGAAGGTAATGATCCATGTGTTAATCAATGGACTGGGATAGTTTGTTCAGGTGGAAACATTTCTGTTATAAACTTTCAGAACATGGGCTTGTCTGGCACTATTTCTCCTAGTTTTGCTAGACTTACATCTGTGACAAAGTTGCTTCTTGCTAACAATTATATCACTGGTACCATACCAAATGAACTTACTAGCATGCCTTTTCTTCAAGAGTTAGATGTTTCCAATAATAACTTATATGGTAGAGTACCATCTTTTCGCAAAGGTGTGGTTCTCGAACTCGCTGGCAATCCTGATATTGGAAAAGATAAACCTACTTCTAGTGTTGGAGGTGTTGATAACAAAAATGATGCTGGAATCGTTATTGGAGTTTTGCTAGGGCTTGTTATTTTACTTGGTACAGGGATACTAATATTTATGAAGTACAGAAGAAAATTGAACCCTAAAGAAAAAGTACAAAATCCGACTGAAATAGTAGTACATCCTCGCCATTCTGCAGATAGTAATGATGCTATGAAGATAAGTGTTGTTGGTGTTGGTGGTGGAGGAACTGGTGCATTAAGTCCAACGAGTAATGTTTACCCGATGGAAGCTGGTAGCATGGTGATTTCAATTCAAGTTTTGATAGACGTTACCAACAATTTTAGTGAAGAAAACATATTAGGGAAGGGGGGTTTTGGAACTGTATACAAAGGAGAATTGCATGATGGGACAAAGATTGCAGTGAAAAGGATGCAATCGGGAAGTATGGGAGAGAAAGGACTGAATGAATTCATGGCTGAAATTGCAGTACTTACTAGGGTGAGACACAAGCATTTGGTTGCACTATTGGGGTATTGCTTGGATGGTGATGAGAGACTTCTTGTTTATGAATACATGCCTCAAGGTGCTCTTAGTAGATTATTGTTCCATTGGAAAAAGGAAGGGCTAAAACCACTTGAATGGAAGACAAGGCTTACTATTGCATTGGATGTTGCTAGAGGTGTTGAATATCTTCATGATTTGACCCAACAAACTTTTATCCATAGGGATCTCAAACCATCAAACATTTTGCTTGGAGATGATTTGAGGGCTAAAGTATCAGACTTTGGATTGGTTAGGCTAGCTCCAGAAGGAAAAGCCTCATTTCAAACAAGGCTTGCTGGGACTTTTGGATATCTAGCACCAGAGTATGCAGCCACTGGACGACTTACAACAAAGGTTGATGTGTATAGTTTTGGAGTGATCCTTATGGAGATGATAACCGGGAGAAGAGCACTCGATGAAAGTCGGTCGGAGGAGAATTTCCACCTTGTTACATGGTTCTGCAGGATGCTATTGAACAAAGATTCGTTCCGAATGATCATTGATCCAACAATCGATATTGATGATGAGGAAACCTTAGCCAGCATTAGCACTGTTGCAGACTTGGCAGGTCACTGCTGTTCAAGAGAGCCGTACCAGCGTCCGGATATGAGTCATGCAGTGAGTGTTCTATCACCTCTTGTTGAGATTTGGAAGCCTACAGAAGCAGATGTTGATGACATATTTGGTGTCAACTTTGATATGACACTACCAGAAGCACTCAAAAGGTGGCAAGATTTTGAAGGAAACAGTATTTTGGATACTACTTATCCTTTTTCATCAGTGAATACTAATACTAATGGATACAACACAAAGTCCAGCATTCCTCTTAGGCCATCTTTAATTGAAGACTCTGTAACATCTTGA 2772 0.4022 MEKPQLGFGVSSLHCFLLVLSVIFITARGQDYEVMILLKRMIINAPSTLQWTDPDVCKWNHIQCDKGNRVTAIQIGNQTLQGSLPKELENLSQLKRFECQGNNLTGAFPYLSKSLQKLLIHGNMFSSFPNDFFMAMSNLEEVRLDENPFPQWQVPSSLKECLALQSFSAQSVGFVGTIPDFFGNGGPFPGLVYLALSRNYFEGVLPASLSGSSIETLLVNGQNSKTKLNGTLEVLKNMTSLKQIWAHGNSFTGPIPRLSHHDQLFDVSLRDNQLTGVIPPSLMALPRLKVVSLTNNHFQGSPPVFQIGVRVDNNMDNGRNQFCTKVAGEPCSPLVNALLSVVEPLGYPLKFSESWEGNDPCVNQWTGIVCSGGNISVINFQNMGLSGTISPSFARLTSVTKLLLANNYITGTIPNELTSMPFLQELDVSNNNLYGRVPSFRKGVVLELAGNPDIGKDKPTSSVGGVDNKNDAGIVIGVLLGLVILLGTGILIFMKYRRKLNPKEKVQNPTEIVVHPRHSADSNDAMKISVVGVGGGGTGALSPTSNVYPMEAGSMVISIQVLIDVTNNFSEENILGKGGFGTVYKGELHDGTKIAVKRMQSGSMGEKGLNEFMAEIAVLTRVRHKHLVALLGYCLDGDERLLVYEYMPQGALSRLLFHWKKEGLKPLEWKTRLTIALDVARGVEYLHDLTQQTFIHRDLKPSNILLGDDLRAKVSDFGLVRLAPEGKASFQTRLAGTFGYLAPEYAATGRLTTKVDVYSFGVILMEMITGRRALDESRSEENFHLVTWFCRMLLNKDSFRMIIDPTIDIDDEETLASISTVADLAGHCCSREPYQRPDMSHAVSVLSPLVEIWKPTEADVDDIFGVNFDMTLPEALKRWQDFEGNSILDTTYPFSSVNTNTNGYNTKSSIPLRPSLIEDSVTS* 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0890 923 Pfam Leucine rich repeat N-terminal domain 336 371 IPR013210 -
Lan17g0890 923 Pfam Leucine rich repeat N-terminal domain 30 65 IPR013210 -
Lan17g0890 923 ProSitePatterns Protein kinases ATP-binding region signature. 575 597 IPR017441 GO:0005524
Lan17g0890 923 PANTHER TRANSFERASE, PROTEIN KINASE RLK-PELLE-LRR-IX FAMILY-RELATED 10 923 - -
Lan17g0890 923 Gene3D Ribonuclease Inhibitor 29 329 IPR032675 -
Lan17g0890 923 ProSiteProfiles Protein kinase domain profile. 569 850 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g0890 923 Gene3D Transferase(Phosphotransferase) domain 1 647 863 - -
Lan17g0890 923 CDD STKc_IRAK 575 849 - -
Lan17g0890 923 ProSitePatterns Serine/Threonine protein kinases active-site signature. 694 706 IPR008271 GO:0004672|GO:0006468
Lan17g0890 923 Gene3D Ribonuclease Inhibitor 334 458 IPR032675 -
Lan17g0890 923 Gene3D Phosphorylase Kinase; domain 1 540 646 - -
Lan17g0890 923 SUPERFAMILY Protein kinase-like (PK-like) 545 846 IPR011009 -
Lan17g0890 923 SUPERFAMILY L domain-like 42 306 - -
Lan17g0890 923 Pfam Protein kinase domain 570 843 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g0890 923 PANTHER OSJNBA0070M12.3 PROTEIN 10 923 - -
Lan17g0890 923 SMART serkin_6 569 850 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g0890 923 SUPERFAMILY L domain-like 336 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0890 Lan-Chr17 11543741 11547773 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0890 70 859 Receptor kinase-like Gene Family AT1G55610 29.704 3.73e-81 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Lan17g0890 Pkinase 8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0890 - K00924 gmx:100788903 1249.57