Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0872 ATGGACTCTTACTCATCCTCGATCCTTCCTTCTTCTCCCCCTCACCGCCCTGTCGATGCCTACCCCAATCTCAACATAATCAAATCCTTCCCAAACCACCCTAATTCTCCTGCTACTCTTGCTCCTCCCCCACCATGTAATGACGATCACCCTTCTTATTCCAAGATGATTTGTAGTGCAATTAGGGCTTTGAAAGATGAAAATGGTTCTAGCAAGACGGCTATTAGAAAGTACATCGCACAAGAGTACAAAGATCTCCATCCTCCCAATCACGACACCTTGTTGACTCAAAACCTAAAATACATGAAGGAGAAGAATATTCTCATTATGGTTAAAAGATCCTACAAGTTCCCAGCTGCTAGATCTGACAAATCGATGTCACTTTCACTATCTTCCTCCTCCCTTGTCTCGAGGGGACATGATTGTCTGCCAACGTCTATCAAAGCCCAATCCTGA 456 0.443 MDSYSSSILPSSPPHRPVDAYPNLNIIKSFPNHPNSPATLAPPPPCNDDHPSYSKMICSAIRALKDENGSSKTAIRKYIAQEYKDLHPPNHDTLLTQNLKYMKEKNILIMVKRSYKFPAARSDKSMSLSLSSSSLVSRGHDCLPTSIKAQS* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0872 151 PANTHER HISTONE H1-LIKE 34 123 - -
Lan17g0872 151 Pfam linker histone H1 and H5 family 50 112 IPR005818 GO:0000786|GO:0003677|GO:0006334
Lan17g0872 151 CDD H15 50 120 IPR005818 GO:0000786|GO:0003677|GO:0006334
Lan17g0872 151 SMART h15plus2 47 114 IPR005818 GO:0000786|GO:0003677|GO:0006334
Lan17g0872 151 Gene3D - 47 127 IPR036388 -
Lan17g0872 151 MobiDBLite consensus disorder prediction 1 22 - -
Lan17g0872 151 PANTHER HISTONE H1 34 123 - -
Lan17g0872 151 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 49 119 IPR005818 GO:0000786|GO:0003677|GO:0006334
Lan17g0872 151 SUPERFAMILY "Winged helix" DNA-binding domain 49 121 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0872 Lan-Chr17 11047424 11048008 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0872 56 118 Single Myb Histone (SMH) Gene Family AT1G49950 39.683 5.29e-07 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0872 - - lang:109330870 274.248