Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0871 ATGAAGAATATTCTTAAGAAGCTTCATATCATGTCTAACCAATCAGAAGATACAGCAGCACAAGGGTCTACTACTTCATCAAGGGGAAACAAGTTCAATGATGGTTCATCTACCCCGAAAAAGATTTCGAATTGGTTGCATTCAGTTTCTAATAGGCAGAGTCCTAGTCCTCCATCTCCCCAAAGAGTGGAGCTATTTGATTCAGTGAGCAGTGGTGGATTGGATATTGTTTCTGATCCAGTGAGGCGTGATTCGGGGTCTAGCACTTCAAGGGATCCTGAAATGGAAGAAGAACAGCAAATTCAATTGGCTTTGGAGCTGAGTGCAAAAGAGGACCCAGAAGCTGTGCAAATTGAAGCTGTTAAGCAGATCAGTTTAGGATCTTGTGACCCTGATAATACACCAGCTGAAGTTGTGGCCTACAGATACTGGAATTACAATGCTCTTGGTTATGATGACAAGATCTCAGATGGTTTCTATGACCTTTATGGGATCTTAACCGAGTCAACATCTGCAAGAATGCCTTCCTTAGTAGATCTGCAAGGAACACCAACCGCAGATGGTGTCATATGGGAAGCAGTCTTGGTCAATAGGACTGGAGATTCCAATTTGTTGAAACTTGAGCAAAAAGCGCTAGAACTGGCAGACGAGTCGAGAACAGATTTTGAAGTTGTCGTAGATAGTAGTTTGGTGCACAAGATTGCAATATTAGTGGCTGACTATATGGGTGGACCTGTTGAAGATCCTGCAAGCATGACTAGAGCATGGCGGAGTCTTTGTTACAGTTTAAAAGCAACCCTTGGTAGCATGGTTTTGCCACTTGGTTCACTAACCATTGGATTGGCTCGGCATCGTGCATTGTTATTTAAGGTTTTAGCTGATAGTTTAGGCATCCCATGCCGGTTGGTGAAAGGACTGCAATATACTGGTTCGGATGATGTGGCAATGAACTTTGTCAGAATTGATGATGGAAGGGAGTACATTGTTGACCTAATGGCAGATCCTGGAACACTTATTCCATCTGATGCAACTGGATCACATATCGAGTACGATGAATCTTCTTTTGGTTTTGATTCCTCTCATATAGCATCGTTCAACAGCAGAGTTGGAACTTTGTCTAAAGAAACTTCAGACTTTGGGATACTGGATAAAGGAAACAGATCAAAACATAATGCATACACAGAAAAGGAATCTGTAGTAAGCAAACCTGCTACAAGGAAAGACGAATTAAAGAAACCGTCAAGTGAATTAAAAAATACTCCCAATGAAGAGAACATCACAGTGAGTGAATCTCCTACCAGACCTAATTATCCATATATGCATGTTAGATCTCCTTCTTGGACTGAAGGCATCAGTTCCCCTGCAGTACGTAGAATGAAAGTCAAAGATGTTTCGCAATATATGATCGATGCTGCAAAGGAGAACCCAAACTTAGCTCAAAAACTTCATGATGTTTTACTTGAAAGTGGTGTTGTTGCTCCTGCAAACTTATTTTCTGAAATTTATCATGACCAATTAGGTTCCTCATCCGAGGCTAGTTTACCAACTACAGAAAAAGATGAATTTAAACAGGGAGGTGTGCATAAAAAAACTAAGGCTTTATTTTTGCCTCCTTTGCCTCACCTCAGACATCATTCCAAAGCAAGTCCTGTAAGTCAGCCAGTGCCTTCTGAGCCTGTAGATGGTTTAGGAATCGGCATTCCTCCTGATACAAGGACAAACTCTGGACAACATGCACTATCTCAGGAAGCAGCAACTCAGGCAAAATATGGGGAAAATGTACCAGTTGCTGCTGCAGCAGCAGCAGCTGCTGCTGTTGTGGCATCTTCTATGGTAGTTGCAGTGAAGAAGTCAAGCACTGAATCAAATATCGAGATTCCTCTAGCAGCTGCTACTGCGACAGCTGCAGCTGTAGTGGCAACTACTGCTGCTGTCAGTAAACAGCATGAGCAGGGCAGTCGGAGTGACGGAGATACGGATGGGGAGAATATTGCTTCGGGAGCAAACTCAGAAGGCGAGAGAACATCTGATAGATCAGGAGGTAATGACAGCACAAGATCTGAATCTGCGCTGGATGATGTTGCCGAGTATGACGTTCCATGGGAGGAAATCACCATGGGCGAGCGTATTGGACTTGGATCATATGGGGAAGTGTACCGAGGTGAATGGCACGGAACTGAAGTTGCTGTGAAAAGGTTTCTTGATCAAGATTTCTACGGTGAAGCACTTGAAGAGTTCAAAAGTGAGGTCCAAATAATGAAAAGACTGAGGCATCCAAATGTTGTTCTCTTCATGGGAGCTGTAACTCGACCACCAAATCTTTCAATTGTTACTGAGTTTCTTCCCAGAGGGAGTTTGTATAGATTAATTCATCGACCTAGCAATCAATTAGATGTTCGAAGGCGATTGAGGATGGCCCTGGATGCTGCTCGAGGAATGAACTATTTGCACAACTGCACTCCAATGATAGTGCATCGTGATTTGAAGTCCCCGAATCTTCTTGTTGACAAAAACTGGGTTGTAAAGGTTTGTGATTTTGGCTTGTCGCGAATGAAGAATAGTACATTTCTTTCTTCAAGATCAACTGCAGGAACAGCTGAGTGGATGGCTCCAGAAGTGCTGAGAAATGAACTTTCAGATGAAAAGTGCGACGTTTATAGCTACGGGGTCATATTATGGGAGCTCTGTACTTTGCAGCAACCCTGGGGAGGAATGAATCCAATGCAAGTTGTTGGTGCAGTGGGTTTCCAACATCGCCGTCTTGACATTCCAGATGATATAGACCCGGCTGTTGCAGATATTATCAGGCAATGCTGGCAGACAGATCCAAAGTTGAGACCAACATTTGCTGAAATCATGGCTGCTCTGAAGCCATTGCAGAAGCCAATTACTAGTTCTCAAGTGCCTAGACCAAGTTCTCAGTCATTGCGAGCTGCTGAAGATGCCATTTGA 2952 0.4329 MKNILKKLHIMSNQSEDTAAQGSTTSSRGNKFNDGSSTPKKISNWLHSVSNRQSPSPPSPQRVELFDSVSSGGLDIVSDPVRRDSGSSTSRDPEMEEEQQIQLALELSAKEDPEAVQIEAVKQISLGSCDPDNTPAEVVAYRYWNYNALGYDDKISDGFYDLYGILTESTSARMPSLVDLQGTPTADGVIWEAVLVNRTGDSNLLKLEQKALELADESRTDFEVVVDSSLVHKIAILVADYMGGPVEDPASMTRAWRSLCYSLKATLGSMVLPLGSLTIGLARHRALLFKVLADSLGIPCRLVKGLQYTGSDDVAMNFVRIDDGREYIVDLMADPGTLIPSDATGSHIEYDESSFGFDSSHIASFNSRVGTLSKETSDFGILDKGNRSKHNAYTEKESVVSKPATRKDELKKPSSELKNTPNEENITVSESPTRPNYPYMHVRSPSWTEGISSPAVRRMKVKDVSQYMIDAAKENPNLAQKLHDVLLESGVVAPANLFSEIYHDQLGSSSEASLPTTEKDEFKQGGVHKKTKALFLPPLPHLRHHSKASPVSQPVPSEPVDGLGIGIPPDTRTNSGQHALSQEAATQAKYGENVPVAAAAAAAAAVVASSMVVAVKKSSTESNIEIPLAAATATAAAVVATTAAVSKQHEQGSRSDGDTDGENIASGANSEGERTSDRSGGNDSTRSESALDDVAEYDVPWEEITMGERIGLGSYGEVYRGEWHGTEVAVKRFLDQDFYGEALEEFKSEVQIMKRLRHPNVVLFMGAVTRPPNLSIVTEFLPRGSLYRLIHRPSNQLDVRRRLRMALDAARGMNYLHNCTPMIVHRDLKSPNLLVDKNWVVKVCDFGLSRMKNSTFLSSRSTAGTAEWMAPEVLRNELSDEKCDVYSYGVILWELCTLQQPWGGMNPMQVVGAVGFQHRRLDIPDDIDPAVADIIRQCWQTDPKLRPTFAEIMAALKPLQKPITSSQVPRPSSQSLRAAEDAI* 984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0871 983 PRINTS Tyrosine kinase catalytic domain signature 778 791 IPR001245 GO:0004672|GO:0006468
Lan17g0871 983 PRINTS Tyrosine kinase catalytic domain signature 817 835 IPR001245 GO:0004672|GO:0006468
Lan17g0871 983 PRINTS Tyrosine kinase catalytic domain signature 864 874 IPR001245 GO:0004672|GO:0006468
Lan17g0871 983 PRINTS Tyrosine kinase catalytic domain signature 883 905 IPR001245 GO:0004672|GO:0006468
Lan17g0871 983 PRINTS Tyrosine kinase catalytic domain signature 927 949 IPR001245 GO:0004672|GO:0006468
Lan17g0871 983 MobiDBLite consensus disorder prediction 8 66 - -
Lan17g0871 983 MobiDBLite consensus disorder prediction 383 418 - -
Lan17g0871 983 MobiDBLite consensus disorder prediction 963 983 - -
Lan17g0871 983 MobiDBLite consensus disorder prediction 383 439 - -
Lan17g0871 983 CDD STKc_MAP3K-like 710 956 - -
Lan17g0871 983 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 973 - -
Lan17g0871 983 MobiDBLite consensus disorder prediction 419 434 - -
Lan17g0871 983 SUPERFAMILY Protein kinase-like (PK-like) 691 954 IPR011009 -
Lan17g0871 983 ProSitePatterns Protein kinases ATP-binding region signature. 710 731 IPR017441 GO:0005524
Lan17g0871 983 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 1 973 - -
Lan17g0871 983 Gene3D Phosphorylase Kinase; domain 1 697 781 - -
Lan17g0871 983 Gene3D Transferase(Phosphotransferase) domain 1 783 967 - -
Lan17g0871 983 MobiDBLite consensus disorder prediction 658 675 - -
Lan17g0871 983 Pfam Ethylene-responsive protein kinase Le-CTR1 136 339 - -
Lan17g0871 983 ProSitePatterns Serine/Threonine protein kinases active-site signature. 823 835 IPR008271 GO:0004672|GO:0006468
Lan17g0871 983 ProSiteProfiles Protein kinase domain profile. 704 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g0871 983 MobiDBLite consensus disorder prediction 1 99 - -
Lan17g0871 983 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 96 115 IPR003903 -
Lan17g0871 983 MobiDBLite consensus disorder prediction 647 692 - -
Lan17g0871 983 SMART serkin_6 704 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g0871 983 Pfam Protein tyrosine and serine/threonine kinase 704 956 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0871 Lan-Chr17 11019969 11029973 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0871 1 976 MAP Kinase Kinase Kinase AT1G73660 60.409 0.0 1121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Lan17g0871 PK_Tyr_Ser-Thr 3.2e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0871 - - gmx:100778331 1476.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0871 17 11019969 11029973 Lan6g1011 6 9624291 9633254 LSH
Lan17g0871 17 11019969 11029973 Lan3g0358 3 2616668 2625295 PCT
Lan3g0358 3 2616668 2625295 Lan17g0871 17 11019969 11029973 PCT