Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0867 ATGGGAGGAGACAAAGATTCACCAAAGACACCAGGAGAACACAGTAAATCACTCATGGAAGACATTCTCGGCCTCCTTAGGATTCACATCAGGCGTGGCGTCAACCTCGCAGTTCGCGATGTCAGTACAAGCGATCCATATGTGGTTGTTAGGATGGGCAAGCAGAAACTCAAAACTAGAGTGATTAAAAAGGATGTGAATCCTGAGTGGAATGAAGATCTCACACTTTCTGTTTCTAATCCTGTTTGTCCATTCGTGCTGACTGTGTATGATCACGATACATTTAGCAAAGATGACAAAATGGGAGATGCAGAATGTGACATAACACCATTTATAGAAGCCTTAAAGATGAACACAGAAGGCCTACCAAATGGTACTATAATAAGGAGAATACATCCAAGCAGAAAAAATTGTTTGGCTGATGATAGCTGCATTGTTTTCAATGATGGCAAAGTTGTTCAAGATATTGTCCTTAGATTGAGAAATGTGGAGTGTGGTGAAGTCGAAATCCAAATGGAATGGATTGATCTTCCTGGTTCCAAGGTCTTATAA 552 0.4076 MGGDKDSPKTPGEHSKSLMEDILGLLRIHIRRGVNLAVRDVSTSDPYVVVRMGKQKLKTRVIKKDVNPEWNEDLTLSVSNPVCPFVLTVYDHDTFSKDDKMGDAECDITPFIEALKMNTEGLPNGTIIRRIHPSRKNCLADDSCIVFNDGKVVQDIVLRLRNVECGEVEIQMEWIDLPGSKVL* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0867 183 CDD C2_ArfGAP 23 166 - -
Lan17g0867 183 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 12 182 IPR044562 -
Lan17g0867 183 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 22 109 IPR035892 -
Lan17g0867 183 Pfam C2 domain 24 110 IPR000008 -
Lan17g0867 183 ProSiteProfiles C2 domain profile. 10 122 IPR000008 -
Lan17g0867 183 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4-LIKE 12 182 - -
Lan17g0867 183 Gene3D C2 domain 20 181 IPR035892 -
Lan17g0867 183 SMART C2_3c 25 120 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0867 Lan-Chr17 10945311 10947003 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0867 56 183 C2H2 Transcription Factor Family AT1G70790 56.154 2.44e-48 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0867 - - rcu:8283127 277.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0867 17 10945311 10947003 Lan6g1000 6 9542069 9543492 LSH
Lan17g0867 17 10945311 10947003 Lan3g0374 3 2793601 2796070 PCT
Lan3g0374 3 2793601 2796070 Lan17g0867 17 10945311 10947003 PCT